Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14h12r
         (777 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    61   1e-11
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    27   0.15 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   1.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   4.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   7.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.7  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   9.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   9.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 60.9 bits (141), Expect = 1e-11
 Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
 Frame = -2

Query: 710 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 531
           +RIVGG+       P +AG+      G   ICGA++++    +TAAHC         +  
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHCIIDENTT--KLA 214

Query: 530 LALG----TANIFSGGTRVTTSN-VQMHGSYNM----DTLHNDVAIIN-HNHVGFTNNIQ 381
           + +G    ++   +  T + + N V +H  Y++    D   ND+A++     + F + + 
Sbjct: 215 IVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVG 274

Query: 380 RINLASGS--NNFAGTWAWXAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVI 207
              L      ++FAG+     G+G TS   +G  +   ++ +L ++T   C + +GN  I
Sbjct: 275 PACLPFQHFLDSFAGSDVTVLGWGHTS--FNGMLSHILQKTTLNMLTQVECYKYYGN--I 330

Query: 206 IASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQL--IGITSFGSAQG 72
           + + +C   + G+  C  DSGGP+   +  +++L  IGI S+G+  G
Sbjct: 331 MVNAMCAY-AKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECG 376


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 10/38 (26%), Positives = 24/38 (63%)
 Frame = -1

Query: 114 PSTDRYHIVRISSRLPERPSLPASPESHPSTAWIRARI 1
           P+T+ Y+I+ +++RL    +L +    +P  A++ A++
Sbjct: 116 PNTEEYYIIEVNARLSRSSALASKATGYP-LAYVAAKL 152


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 660 CWTCDRTDEWQNFH 619
           CW CD+ +E++  H
Sbjct: 467 CWVCDQCEEYEYVH 480


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 266 LGVFVGCWLP 295
           +GVFV CWLP
Sbjct: 333 MGVFVVCWLP 342


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 266 LGVFVGCWLP 295
           +GVFV CWLP
Sbjct: 333 MGVFVVCWLP 342


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 266 LGVFVGCWLP 295
           +GVFV CWLP
Sbjct: 333 MGVFVVCWLP 342


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 632  HSSVRSQVQQDGGEHQRWRQNHPQ 703
            HSS ++Q QQ   + Q+ +Q  PQ
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQPQ 1518



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = +3

Query: 489 PGAS---GEDVSCAKSEGELTSLGSPG 560
           PG S   GE  S A ++G  T+  SPG
Sbjct: 893 PGCSSKNGEPTSAAFAQGFATAASSPG 919


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 266 LGVFVGCWLP 295
           LGVF+ CWLP
Sbjct: 625 LGVFLICWLP 634


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 266 LGVFVGCWLP 295
           +GVF+ CWLP
Sbjct: 341 MGVFIICWLP 350


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 399 LHQQHPAHQPSQWKQQ 352
           +H QHP  QP Q + Q
Sbjct: 172 MHTQHPHMQPQQGQHQ 187


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -1

Query: 660 CWTCDRTDEWQ 628
           CW CD+ +E++
Sbjct: 557 CWVCDQCEEYE 567


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 266 LGVFVGCWLP 295
           +G FV CWLP
Sbjct: 312 VGGFVACWLP 321


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 569 CWRTRRAQARQFTLALGTANI 507
           CW TR+    Q    +GT+N+
Sbjct: 459 CWDTRKEYIPQNLGVIGTSNL 479


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 266 LGVFVGCWLP 295
           +GVF+ CW+P
Sbjct: 278 MGVFLICWVP 287


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 458 SYNMDTLHNDVAIINHNHVGFTNN 387
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 458 SYNMDTLHNDVAIINHNHVGFTNN 387
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 291 SQQPTKTPSEPXGHYQRRLR 232
           S+ P + P E   HY+R  R
Sbjct: 121 SRYPLRPPQEVISHYRRTRR 140


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/49 (24%), Positives = 18/49 (36%)
 Frame = +1

Query: 100 PIS*RLPPLPMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTAL 246
           P+S  +PP P  +  P++      P  P    +       P V   T L
Sbjct: 759 PLSVSIPPPPSAQNVPQNTNSQAIPRIPILPMIPVYCVPVPQVNDSTIL 807


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,393
Number of Sequences: 438
Number of extensions: 4363
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)