Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14g18r
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   190   1e-50
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   190   2e-50
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   183   1e-48
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   128   6e-32
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.5  

>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score =  190 bits (463), Expect = 1e-50
 Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 2/225 (0%)
 Frame = -1

Query: 772 VSGSSTAAELKYALDKFLTFKPVDKLANWVAGNHDNNRVASRYSVELVDGLNMIVMLLPG 593
           VS  S +++ K  +D ++T+ P   + NWV GNHD  R+ SR+  E    +  + +LLPG
Sbjct: 314 VSRDSNSSDFKKLIDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSLLLPG 373

Query: 592 IAVTYMGEEIGMVDGYVSWEDTVDPSGCNTDDPINYWTVSRDPERTPFQWNSEKNAGFST 413
           +AV Y G+EIGM D Y+SWEDT DP GC      NY T+SRDP RTPFQW+   +AGFS+
Sbjct: 374 VAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTPFQWDDSVSAGFSS 432

Query: 412 GDKTWLPVAEGYETLNVEIQKSTSRSHLNVYKQLTRLRNEPVFRYGRFESVALNPDIFAF 233
              TWL V E Y+T+N+  +K    S  N++K+   L+  P F+     +  LN ++FAF
Sbjct: 433 SSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLNDNVFAF 492

Query: 232 KR--WHDGEIYVTVINLKNRDHTIDLTYFEHVVGHLEVVLTDIRS 104
            R    +G +Y  ++N  N +  +DL  F +V   L +   +  S
Sbjct: 493 SRETEDNGSLY-AILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNS 536


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  190 bits (462), Expect = 2e-50
 Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 2/225 (0%)
 Frame = -1

Query: 772 VSGSSTAAELKYALDKFLTFKPVDKLANWVAGNHDNNRVASRYSVELVDGLNMIVMLLPG 593
           VS  S +++ K  +D ++T+ P   + NWV GNHD  R+ SR+  E    +  + +LLPG
Sbjct: 314 VSRDSNSSDFKKLVDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSLLLPG 373

Query: 592 IAVTYMGEEIGMVDGYVSWEDTVDPSGCNTDDPINYWTVSRDPERTPFQWNSEKNAGFST 413
           +AV Y G+EIGM D Y+SWEDT DP GC      NY T+SRDP RTPFQW+   +AGFS+
Sbjct: 374 VAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTPFQWDDSVSAGFSS 432

Query: 412 GDKTWLPVAEGYETLNVEIQKSTSRSHLNVYKQLTRLRNEPVFRYGRFESVALNPDIFAF 233
              TWL V E Y+T+N+  +K    S  N++K+   L+  P F+     +  LN ++FAF
Sbjct: 433 SSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLNDNVFAF 492

Query: 232 KR--WHDGEIYVTVINLKNRDHTIDLTYFEHVVGHLEVVLTDIRS 104
            R    +G +Y  ++N  N +  +DL  F +V   L +   +  S
Sbjct: 493 SRETEDNGSLY-AILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNS 536


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score =  183 bits (446), Expect = 1e-48
 Identities = 83/207 (40%), Positives = 131/207 (63%)
 Frame = -1

Query: 778 SEVSGSSTAAELKYALDKFLTFKPVDKLANWVAGNHDNNRVASRYSVELVDGLNMIVMLL 599
           ++++  STA++ K  +D+++   P   + NWV+GNHDN+RVASR+  +  D + M+ + L
Sbjct: 318 ADLNNQSTASDFKQLIDRWVANVPNGSVTNWVSGNHDNHRVASRFGRQRGDEIVMLTLTL 377

Query: 598 PGIAVTYMGEEIGMVDGYVSWEDTVDPSGCNTDDPINYWTVSRDPERTPFQWNSEKNAGF 419
           PGI V Y G+EIGM D + ++++TVDP+GCN   P  Y+  SRDPERTP+QW++  +AGF
Sbjct: 378 PGIGVVYNGDEIGMEDRWFTYQETVDPAGCNA-GPAKYYLKSRDPERTPYQWDNSTSAGF 436

Query: 418 STGDKTWLPVAEGYETLNVEIQKSTSRSHLNVYKQLTRLRNEPVFRYGRFESVALNPDIF 239
           S  +KTWLPV E Y++LN+  QK    SH   +K L+ L+ +PV   G  E   ++  + 
Sbjct: 437 SQTNKTWLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGRVL 496

Query: 238 AFKRWHDGEIYVTVINLKNRDHTIDLT 158
           + KR    +  + ++N      T++LT
Sbjct: 497 SVKRELGNDTVIVMMNFSKNPVTVNLT 523


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase protein.
          Length = 588

 Score =  128 bits (309), Expect = 6e-32
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 6/254 (2%)
 Frame = -1

Query: 778  SEVSGSSTAAELKYALDKFLTFKPVDKLANWVAGNHDNNRVASRYSVELVDGLNMIVMLL 599
            ++ + SST  + K  +D ++   P + + NWV GNHD  RV +RY     D + M+ M+L
Sbjct: 325  TDANSSSTPEQFKVIIDNWIKGTPQNNVPNWVMGNHDRVRVGTRYPGR-ADHMIMLEMIL 383

Query: 598  PGIAVTYMGEEIGMVDGYVSWEDTVDPSGCNTDDPINYWTVSRDPERTPFQWNSEKNAGF 419
            PG+AVTY GEEIGMVD    ++  V                 RD  RTPFQW++  NAGF
Sbjct: 384  PGVAVTYYGEEIGMVDNTTIYKYDV-----------------RDGCRTPFQWDNSINAGF 426

Query: 418  S-----TGDKTWLPVAEGYET-LNVEIQKSTSRSHLNVYKQLTRLRNEPVFRYGRFESVA 257
            S       +K WLPV   Y++ LN+E +K  S SH ++Y  LT LR   V + G F    
Sbjct: 427  SKIAENLLEKNWLPVHTSYKSGLNLEQEKKDSISHYHLYTNLTALRKRDVLKKGNFTIEI 486

Query: 256  LNPDIFAFKRWHDGEIYVTVINLKNRDHTIDLTYFEHVVGHLEVVLTDIRSKKVPGDLLE 77
            LN  + A  R  + E    +IN    +  +D++   +   + ++  + + S       + 
Sbjct: 487  LNKTVLAVVRQSEEEAVSLLINFSKNNTIVDISKLVNKRNNAKIYTSSVNSNLTVNQTVN 546

Query: 76   ASQAEIVAHESLVL 35
                 I    S+++
Sbjct: 547  PVAINIPGDTSIIV 560


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 370 GFHSPPLLAAMFYHQ*RIQH 429
           G  SPPL+ +  +HQ   QH
Sbjct: 157 GPDSPPLVESQMHHQMHTQH 176


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 522 TPVDVTQMILSTTGLFLETLNAHHFNGTL 436
           TPV      L  TGL++  L+ H F+  L
Sbjct: 324 TPVMPDLNALIATGLYINDLSMHDFSRDL 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,970
Number of Sequences: 438
Number of extensions: 4016
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)