Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14g18f
(586 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 166 2e-42
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 56 3e-09
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 55 7e-09
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 50 2e-07
SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 47 2e-06
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 46 3e-06
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 44 1e-05
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 44 2e-05
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 41 2e-04
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 40 3e-04
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 38 0.001
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 34 0.013
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 27 1.5
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 27 2.7
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 26 3.5
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 26 4.7
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 4.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.2
SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces pomb... 25 6.2
SPAC1B3.18c |mrps18||mitochondrial ribosomal protein subunit S18... 25 6.2
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 25 6.2
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 8.1
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 25 8.1
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 166 bits (404), Expect = 2e-42
Identities = 72/152 (47%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Frame = +1
Query: 133 DWWEKTVFYQIYPRSFKDSDGDGIGDLNGITDSLEYLKELGVGATWLSPIFKSPMYDFGY 312
+WW +T YQIYP SFKDS+GDG GDL GI ++YLK L V + WL PI+ SP+ D GY
Sbjct: 12 NWWRETSVYQIYPASFKDSNGDGFGDLEGIISKVDYLKALNVESIWLCPIYPSPLKDMGY 71
Query: 313 DISDFYAIQEEYGTMEDFERLLQKAKELDIKIVLDFVPNHGSNESVWFEEALKGH-EKYY 489
D+SD+ I YGT+ED +RL++ E D+K+V+D V NH S++ WF+E+
Sbjct: 72 DVSDYKQIDSRYGTLEDLDRLMKALHERDMKLVMDLVLNHTSDQHEWFKESRSSKTNPKR 131
Query: 490 NYFVWEDGVEDENGKLNPPNNWVSVFRKSAWE 585
+++ W+ +E G+ PPNNW S F SAWE
Sbjct: 132 DWYFWKPARYNEKGERLPPNNWRSYFDTSAWE 163
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 56.4 bits (130), Expect = 3e-09
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
Frame = +1
Query: 205 GDLNGITDSLEYLKELGVGATWLSPIFKSPMYD-------FGYDISDFYAIQEEYGTMED 363
G NGI + L+Y++ +G A W+SPIF++ + GY ++ Y + +GT E+
Sbjct: 66 GTWNGIRNHLDYIQGMGFDAIWISPIFENVEGNDIDGSSYHGYWTTNLYELNHHFGTKEE 125
Query: 364 FERLLQKAKELDIKIVLDFVPN----HGSNESVWFEEALKGHE-KYYNYFVWED 510
F L+Q+ + DI I+LD N +G E + FE+ + ++ +++ W D
Sbjct: 126 FMELIQELHKRDIWILLDVAINSMAINGPLEQMSFEKVIPFNDASFFHPHCWVD 179
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 55.2 bits (127), Expect = 7e-09
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Frame = +1
Query: 130 LDWWEKTVFYQIYPRSFK-DSDG---DGIGDL------NGITDSLEYLKELGVGATWLSP 279
L W K V YQ+ F D D G+L GIT +L+Y+K LG A W+SP
Sbjct: 16 LKLWRKQVIYQVLTDRFALDEDNFYAKASGNLYLGGTWKGITRNLDYIKSLGCTAIWISP 75
Query: 280 IFK--SPMYD-----FGYDISDFYAIQEEYGTMEDFERLLQKAKELDIKIVLDFVPNH 432
I K S D GY D + E +GT ED + L+ E ++ ++D V NH
Sbjct: 76 IVKNISETTDCGQAYHGYWAQDMTQLNENFGTEEDLKELVNAIHEKNMLCMVDIVVNH 133
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 50.4 bits (115), Expect = 2e-07
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Frame = +1
Query: 139 WEKTVFYQIYPRSFKDSDGDGI------------GDLNGITDSLEYLKELGVGATWLSPI 282
W K + YQI F DG G GI + L+Y++++G A W+SPI
Sbjct: 27 WRKRIIYQILTDRFAVDDGSTDNPCDPDANQYCGGTWKGIENKLDYIEDMGFNAIWISPI 86
Query: 283 FKSPMYDF--------GYDISDFYAIQEEYGTMEDFERLLQKAKELDIKIVLDFVPN 429
K+ D GY +D+ ++ E +GT +D L+ A + I ++LD + N
Sbjct: 87 DKNIEGDIDGAGYAYHGYWNTDYESLNEHFGTEDDLVSLITAAHKAGIWVMLDSIVN 143
>SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog
Mde5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 46.8 bits (106), Expect = 2e-06
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +1
Query: 205 GDLNGITDSLEYLKELGVGATWLSPIFKS----PMYD---FGYDISDFYAIQEEYGTMED 363
G+ GI D L+Y++ +G A W+SPI K+ Y GY D Y + +GT +D
Sbjct: 62 GNWRGIIDKLDYIQGMGFTAIWISPIIKNIEGRTKYGEAYHGYWPQDLYTLNPHFGTEQD 121
Query: 364 FERLLQKAKELDIKIVLDFVPNH-GSNE 444
L + + +++D V NH GS++
Sbjct: 122 LIDLADALHDRGMYLMVDTVVNHMGSSD 149
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 46.4 bits (105), Expect = 3e-06
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Frame = +1
Query: 175 SFKDSDGDGIGDLNGITDSLEYLKELGVGATWLSPIFKSPMYDFGYD--------ISDFY 330
SF DS G G +GI L+Y++ +G A W+SP+ K+ +G D +DF
Sbjct: 52 SFDDSSYCG-GTWSGIRSKLDYIQGMGFNAIWISPVEKNLEGSYGSDGEAYHGYWNTDFT 110
Query: 331 AIQEEYGTMEDFERLLQKAKELDIKIVLDFVPNH----GSNESVWFEEALKGHE-KYYNY 495
+ E +G+ +D L+ D+ I+ D + N G +++ + + ++ Y++
Sbjct: 111 QLNEHFGSEDDLIDLITDMHNRDMWIMFDALANSMAIPGPTDNISYSNLVPFNDSSYFHP 170
Query: 496 FVWEDGVEDEN 528
+ W D + N
Sbjct: 171 YCWIDYGSNNN 181
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 44.4 bits (100), Expect = 1e-05
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = +1
Query: 205 GDLNGITDSLEYLKELGVGATWLSPIFKS----PMYD---FGYDISDFYAIQEEYGTMED 363
G GI L+Y++ LG A W+SPI K+ Y GY D + +GT +D
Sbjct: 56 GTWRGIIQKLDYIQSLGCTAVWISPIVKNIEGVTGYGEAYHGYWAEDLTQLNPHFGTKQD 115
Query: 364 FERLLQKAKELDIKIVLDFVPNH 432
L+ + + ++ ++D V NH
Sbjct: 116 LTELVDQLHKRNMLCMIDIVVNH 138
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +1
Query: 205 GDLNGITD--SLEYLKELGVGATWLS--PIFKSPMYDFGYDISDFYAIQEEYGTMEDFER 372
GD+ G+ SL+YL+ +G+ A +++ P P Y GY DF + + GT+ +
Sbjct: 103 GDIVGLVTPRSLDYLESMGIKAVYIAGTPFQNLPWYPDGYSPLDFTLLDKHTGTLNQWHE 162
Query: 373 LLQKAKELDIKIVLDF 420
+ K E +V+DF
Sbjct: 163 AIMKLHERGFYVVVDF 178
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 40.7 bits (91), Expect = 2e-04
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = +1
Query: 205 GDLNGITDSLEYLKELGVGATWLSPI---FKSPMYD----FGYDISDFYAIQEEYGTMED 363
G+ GI D L+Y+++LG A +SP+ + P Y G+ ++Y + +G ED
Sbjct: 62 GNWQGIVDHLDYIRDLGFTAISISPVVEQLEGPEYHGEAYHGHRPKNYYRLNPHFGNEED 121
Query: 364 FERLLQKAKELDIKIVLDFVPNHGSNESVWFEE 462
+ L + +++D NH +E +FE+
Sbjct: 122 LKELSDALHGKGMYLMVDVAINHTISE--YFED 152
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 39.9 bits (89), Expect = 3e-04
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +1
Query: 157 YQIYPRSFKDSDGDGIGDLNGITDSLEYLKELGVGATWL--SPIFKSPMYDFGYDISDFY 330
Y IY F++ GD+ G+ SL+YL+ +GV A + +P P Y DF
Sbjct: 91 YDIYETEFRNG-----GDIIGVRQSLDYLQGMGVKAVYFAGTPFVNMPWGADQYSPLDFT 145
Query: 331 AIQEEYGTMEDFERLLQKAKELDIKIVLD 417
+ GT+ D+ +++ + +++D
Sbjct: 146 LLDPHLGTINDWRGTIEEMHSKGMYVIVD 174
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 37.5 bits (83), Expect = 0.001
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 157 YQIYPRSFKDSDGDGIGDLNGITDSLEYLKELGVGATWL--SPIFKSPMYDFGYDISDFY 330
Y IY F++ GD+ G+ DSL+YL+ +G+ ++ +P P Y D+
Sbjct: 90 YDIYETGFRNG-----GDIIGLKDSLDYLEIMGIKVIYIAGTPFLNQPWGADQYSPLDYT 144
Query: 331 AIQEEYGTMEDFERLLQKAKELDIKIVLD 417
+ GT+ + +++ +VLD
Sbjct: 145 ILDHHSGTIAQWRDTIEEIHRRGFYLVLD 173
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 34.3 bits (75), Expect = 0.013
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +1
Query: 142 EKTVF-YQIYPRSFKDSDGDGIGDLNGITDSLEYLKELGVGATWL--SPIFKSPMYDFGY 312
EKT F Y I SF++ GD+ G+ SL+YL+ LG ++ +P P Y
Sbjct: 89 EKTPFEYDISEVSFRNG-----GDIVGLELSLDYLEGLGTQGIYIAGTPFVNMPWGADQY 143
Query: 313 DISDFYAIQEEYGTMEDFERLLQKAKELDIKIVLD 417
D+ + GT++ + + E + +V+D
Sbjct: 144 SPLDYTILDHHLGTIDQWRSTITAMHERGMYLVVD 178
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 328 YAIQEEYGTMEDFERLLQKAKELDIKIVLDFVPNH 432
Y QE Y ED E +++ E + + ++DFV NH
Sbjct: 181 YNEQEFYDDFEDEEEEVEEQVEEEYEPIIDFVLNH 215
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 313 DISDFYAIQEEYGTMEDFERLLQKAKEL 396
DIS +YA+ EEYG+ E L + +++
Sbjct: 70 DISSWYALVEEYGSKGKHEELRETYEQM 97
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = -3
Query: 374 SLSKSSIVPYSSWIA*KSEMSYPKSYI 294
++S+ ++P+S+WI+ S+ PK+ I
Sbjct: 424 AVSRDGVLPFSNWISQVSKTGQPKNAI 450
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 25.8 bits (54), Expect = 4.7
Identities = 10/35 (28%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 235 EYLKELGVGATWLSPI-FKSPMYDFGYDISDFYAI 336
++L G+G+TWL+ F S ++ G+ + ++Y +
Sbjct: 303 QFLDACGLGSTWLNMRGFSSSIHSNGFGLLEWYVL 337
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 63 CEMENWNYFTAGAGFSTVSSKRI 131
CE NW+Y +A A F + S+ +
Sbjct: 567 CEQNNWDYNSALASFLELKSRNV 589
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 6.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 398 SNSFAFCKSLSKSSIVP--YSSWIA*KSEMSYPKSYIGDLKIGDSHVAPTPNSFRYSKLS 225
S+S A SLS SS++P SS ++ S + S S +P +SF S +S
Sbjct: 26 SSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVS 85
Query: 224 VIPFRSPIPSPSLS 183
+S S SL+
Sbjct: 86 SSSQQSSSSSASLT 99
>SPAC644.04 |pct1||RNA 5'-triphosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 25.4 bits (53), Expect = 6.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 286 KSPMYDFGYDISDFYAIQEEYGTMEDFERLLQKAKE 393
K+ D YD ++ + ++ E+G + D QKAK+
Sbjct: 243 KTTQNDPVYDTTERHELEVEFGNIADLRDRAQKAKD 278
>SPAC1B3.18c |mrps18||mitochondrial ribosomal protein subunit
S18|Schizosaccharomyces pombe|chr 1|||Manual
Length = 223
Score = 25.4 bits (53), Expect = 6.2
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 389 KSWILKLFLISYLTTAVTKVFGLKKLSKDTKNITITLSGKTELKMKTEN*ILPTTGSAYS 568
KS + KLF I YL +TKV GL++ + + K EL E+ I P S +
Sbjct: 34 KSVLSKLFFIKYLMLNLTKV-GLRRFWSQSPRRN---APKKELSSLLESTITPKAFSKRT 89
Query: 569 EK 574
E+
Sbjct: 90 EE 91
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.4 bits (53), Expect = 6.2
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 237 ISKGIGCWCDMAITD-FQIANVRF 305
IS+G+ +CD AI D +QI V F
Sbjct: 368 ISRGVLSFCDQAIRDLYQILEVEF 391
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.0 bits (52), Expect = 8.1
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 374 SLSKSSIVPYSSW-IA*KSEMSYPKSYIGDLKIGDSHVAPTPNSFRYSKLSVIPFRSPIP 198
S S+++ +P SS + E S+P S + L S V T +S S P S +
Sbjct: 313 SSSETTNLPSSSSSLVTIGESSFPSSLLSLLTQSFSTVRSTSSSSTDQLTSASPISSSVI 372
Query: 197 SPSLS 183
SPS+S
Sbjct: 373 SPSVS 377
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 25.0 bits (52), Expect = 8.1
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = -3
Query: 473 PLRASSNQTLSLLPWL-GTKSRTILISNSFAFCKSLSKSSIVPYSSWIA*KSEMSYPKSY 297
P+R+++ + L +L L G ++ I+ + + KS I + K++ KS
Sbjct: 460 PVRSAAAEALGVLMKLVGERA----INQYLSPLDDIRKSKIRSFYETATVKAKAPTKKSK 515
Query: 296 IGDLKIGDSHVAPTPNSFRYSKLSVIPFRSPIPSP 192
+ K +S V P++ + K SV+P +PSP
Sbjct: 516 VKPSKQEESKVV-VPSNAKAVKKSVVPSSPVVPSP 549
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,556,334
Number of Sequences: 5004
Number of extensions: 55647
Number of successful extensions: 182
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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