Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14g05f
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   7.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.8  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +2

Query: 137 CNKFYKCTFGQPVEMVCYGNLYF 205
           C  F  C+       + YG L+F
Sbjct: 114 CRNFSTCSSHPTAAFISYGTLFF 136


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +2

Query: 137 CNKFYKCTFGQPVEMVCYGNLYF 205
           C  F  C+       + YG L+F
Sbjct: 113 CRNFSTCSSHPTAAFISYGTLFF 135


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
          protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 99 SDCSGGHRFSARAKATAANININPLIVE 16
          S C+   R +A   +   N++ +PL+VE
Sbjct: 14 SSCTRPSRGNAVPSSQRGNVHNDPLVVE 41


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
          protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 99 SDCSGGHRFSARAKATAANININPLIVE 16
          S C+   R +A   +   N++ +PL+VE
Sbjct: 14 SSCTRPSRGNAVPSSQRGNVHNDPLVVE 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,196
Number of Sequences: 438
Number of extensions: 1446
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)