Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14g01f
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113387-1|AAI13388.1|  248|Homo sapiens family with sequence si...    31   4.8  
BC113385-1|AAI13386.1|  248|Homo sapiens family with sequence si...    31   4.8  
BC052375-1|AAH52375.1|  157|Homo sapiens chromosome 9 open readi...    31   4.8  
BC028019-1|AAH28019.1|   69|Homo sapiens C9orf85 protein protein.      31   4.8  
AL138751-4|CAH72768.1|  179|Homo sapiens chromosome 9 open readi...    31   4.8  
AL138751-3|CAH72766.1|  157|Homo sapiens chromosome 9 open readi...    31   4.8  
AL009173-2|CAI42611.1|  248|Homo sapiens novel protein protein.        31   4.8  
AK094978-1|BAC04467.1|  248|Homo sapiens protein ( Homo sapiens ...    31   4.8  
AK057071-1|BAB71360.1|  179|Homo sapiens protein ( Homo sapiens ...    31   4.8  
AF110315-1|AAD13107.1|  388|Homo sapiens unknown protein.              30   8.3  

>BC113387-1|AAI13388.1|  248|Homo sapiens family with sequence
           similarity 133, member A protein.
          Length = 248

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 19/87 (21%), Positives = 43/87 (49%)
 Frame = +2

Query: 359 ELEKKKEKMTDKQIRTTHF*KCTSH*RDLIEKKKRQTKMAHKLKNNHYVATHRSGVDSPS 538
           E +KK++K + +   ++     +S   D  +++K+Q K   K KN  Y ++  S  +S S
Sbjct: 92  ERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESES 151

Query: 539 SGGYLHRASSRDENDSHRAPSERTLSE 619
                 +   + ++++ +    R+LS+
Sbjct: 152 ESKESVKKKKKSKDETEKEKDVRSLSK 178


>BC113385-1|AAI13386.1|  248|Homo sapiens family with sequence
           similarity 133, member A protein.
          Length = 248

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 19/87 (21%), Positives = 43/87 (49%)
 Frame = +2

Query: 359 ELEKKKEKMTDKQIRTTHF*KCTSH*RDLIEKKKRQTKMAHKLKNNHYVATHRSGVDSPS 538
           E +KK++K + +   ++     +S   D  +++K+Q K   K KN  Y ++  S  +S S
Sbjct: 92  ERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESES 151

Query: 539 SGGYLHRASSRDENDSHRAPSERTLSE 619
                 +   + ++++ +    R+LS+
Sbjct: 152 ESKESVKKKKKSKDETEKEKDVRSLSK 178


>BC052375-1|AAH52375.1|  157|Homo sapiens chromosome 9 open reading
           frame 85 protein.
          Length = 157

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 188 SCQNKRINLRLHRNFCSNCSDLFESILTH*EKSKYEP 298
           S Q K+IN +LH   C  C ++ E  + +   SKY+P
Sbjct: 30  SVQTKKINAKLHDGVCQRCKEVLEWRVKY---SKYKP 63


>BC028019-1|AAH28019.1|   69|Homo sapiens C9orf85 protein protein.
          Length = 69

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 188 SCQNKRINLRLHRNFCSNCSDLFESILTH*EKSKYEP 298
           S Q K+IN +LH   C  C ++ E  + +   SKY+P
Sbjct: 30  SVQTKKINAKLHDGVCQRCKEVLEWRVKY---SKYKP 63


>AL138751-4|CAH72768.1|  179|Homo sapiens chromosome 9 open reading
           frame 85 protein.
          Length = 179

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 188 SCQNKRINLRLHRNFCSNCSDLFESILTH*EKSKYEP 298
           S Q K+IN +LH   C  C ++ E  + +   SKY+P
Sbjct: 30  SVQTKKINAKLHDGVCQRCKEVLEWRVKY---SKYKP 63


>AL138751-3|CAH72766.1|  157|Homo sapiens chromosome 9 open reading
           frame 85 protein.
          Length = 157

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 188 SCQNKRINLRLHRNFCSNCSDLFESILTH*EKSKYEP 298
           S Q K+IN +LH   C  C ++ E  + +   SKY+P
Sbjct: 30  SVQTKKINAKLHDGVCQRCKEVLEWRVKY---SKYKP 63


>AL009173-2|CAI42611.1|  248|Homo sapiens novel protein protein.
          Length = 248

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 19/87 (21%), Positives = 43/87 (49%)
 Frame = +2

Query: 359 ELEKKKEKMTDKQIRTTHF*KCTSH*RDLIEKKKRQTKMAHKLKNNHYVATHRSGVDSPS 538
           E +KK++K + +   ++     +S   D  +++K+Q K   K KN  Y ++  S  +S S
Sbjct: 92  ERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESES 151

Query: 539 SGGYLHRASSRDENDSHRAPSERTLSE 619
                 +   + ++++ +    R+LS+
Sbjct: 152 ESKESVKKKKKSKDETEKEKDVRSLSK 178


>AK094978-1|BAC04467.1|  248|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37659 fis, clone BRHIP2010610, weakly similar to
           GAR2 PROTEIN. ).
          Length = 248

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 19/87 (21%), Positives = 43/87 (49%)
 Frame = +2

Query: 359 ELEKKKEKMTDKQIRTTHF*KCTSH*RDLIEKKKRQTKMAHKLKNNHYVATHRSGVDSPS 538
           E +KK++K + +   ++     +S   D  +++K+Q K   K KN  Y ++  S  +S S
Sbjct: 92  ERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESES 151

Query: 539 SGGYLHRASSRDENDSHRAPSERTLSE 619
                 +   + ++++ +    R+LS+
Sbjct: 152 ESKESVKKKKKSKDETEKEKDVRSLSK 178


>AK057071-1|BAB71360.1|  179|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32509 fis, clone SMINT1000054. ).
          Length = 179

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 188 SCQNKRINLRLHRNFCSNCSDLFESILTH*EKSKYEP 298
           S Q K+IN +LH   C  C ++ E  + +   SKY+P
Sbjct: 30  SVQTKKINAKLHDGVCQRCKEVLEWRVKY---SKYKP 63


>AF110315-1|AAD13107.1|  388|Homo sapiens unknown protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -3

Query: 491 SLICAPFLFVFFFSQ-LNHVNVT 426
           S IC+P  F FF++Q + HVNVT
Sbjct: 54  SYICSPVTFQFFYAQSVKHVNVT 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,969,661
Number of Sequences: 237096
Number of extensions: 1834459
Number of successful extensions: 4395
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4391
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)