Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14g01f
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical p... 36 0.019
Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein. 31 0.54
Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical p... 31 0.54
AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical ... 31 0.54
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81122-13|CAB03356.3| 368|Caenorhabditis elegans Hypothetical p... 28 5.1
AF039044-4|AAG24122.3| 328|Caenorhabditis elegans Serpentine re... 28 5.1
U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical pr... 28 6.7
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z50874-10|CAA90770.1| 302|Caenorhabditis elegans Hypothetical
protein R10E4.11 protein.
Length = 302
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 CSSCQNKRINLRLHRNFCSNCSDLFESILTH*EKSKYEPKLSRNWNILTDVG*MKKYTIE 361
C C N+ ++R + N CS C E++ H EKS Y S++ + + T++
Sbjct: 181 CLECGNRLNDIRTN-NQCSVCKSYAENVEEH-EKSHYRTSTSKHAVMECRYCVRQFRTVK 238
Query: 362 --LEKKKEKMTDKQIRTTHF*KC 424
+E +KEK K +R T F KC
Sbjct: 239 EVIEHEKEKHLAKPLRKTQFFKC 261
>Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein.
Length = 732
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 494 CSL-ICAPFLFVFFF-SQLNHVNVTYIFKNGSFEFACPSFSLFFFLIQWYIFSFSPHLSK 321
CSL + F +V F SQ+++V VTY +FEF C SF LF Y+ P K
Sbjct: 654 CSLSVSLHFPYVCFSDSQIHNVQVTY---PRAFEFNCNSFMLFSVTFASYLLKTYPSTPK 710
>Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 494 CSL-ICAPFLFVFFF-SQLNHVNVTYIFKNGSFEFACPSFSLFFFLIQWYIFSFSPHLSK 321
CSL + F +V F SQ+++V VTY +FEF C SF LF Y+ P K
Sbjct: 654 CSLSVSLHFPYVCFSDSQIHNVQVTY---PRAFEFNCNSFMLFSVTFASYLLKTYPSTPK 710
>AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 494 CSL-ICAPFLFVFFF-SQLNHVNVTYIFKNGSFEFACPSFSLFFFLIQWYIFSFSPHLSK 321
CSL + F +V F SQ+++V VTY +FEF C SF LF Y+ P K
Sbjct: 654 CSLSVSLHFPYVCFSDSQIHNVQVTY---PRAFEFNCNSFMLFSVTFASYLLKTYPSTPK 710
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
B0496.3a protein.
Length = 1551
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +2
Query: 485 LKNNHYVATHRSGVDSPSSGGYL----HRASSRDENDSHRAPSERTLSEYT---TMDERT 643
L + + + H SG +PS+ GY+ H S R DS P T S YT T D+R
Sbjct: 1083 LSTDPFYSHHSSGSAAPSALGYVRPRYHDDSYRTHRDSDYRPMSPT-SRYTAAVTRDDRG 1141
Query: 644 RSPS 655
+S S
Sbjct: 1142 KSTS 1145
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
B0496.3b protein.
Length = 1592
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +2
Query: 485 LKNNHYVATHRSGVDSPSSGGYL----HRASSRDENDSHRAPSERTLSEYT---TMDERT 643
L + + + H SG +PS+ GY+ H S R DS P T S YT T D+R
Sbjct: 1124 LSTDPFYSHHSSGSAAPSALGYVRPRYHDDSYRTHRDSDYRPMSPT-SRYTAAVTRDDRG 1182
Query: 644 RSPS 655
+S S
Sbjct: 1183 KSTS 1186
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 533 PSSGGYLHRASSRDEN-DSHRAPSERTLSEYTTMDE 637
PSSGG L R S+ D+N D+ R +R +E ++ E
Sbjct: 477 PSSGGALRRLSANDQNTDAMRFAKQRVSNEQMSVAE 512
>Z81122-13|CAB03356.3| 368|Caenorhabditis elegans Hypothetical
protein T13F2.5 protein.
Length = 368
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -3
Query: 488 LICAPFLFVFFFSQLNHVNVTYIFKN----GSFEFACPSFSLFF 369
L C F FV + H N+T++ KN F AC F ++F
Sbjct: 54 LECGVFFFVLCTNSQYHPNLTWLLKNLVAQYFFSMACRLFQIYF 97
>AF039044-4|AAG24122.3| 328|Caenorhabditis elegans Serpentine
receptor, class t protein17 protein.
Length = 328
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 438 RQCDVHFQKWVVRICLSVIFSFFFSNSMVYFFI*PTSVKMFQFRDNFGSYF 286
R DV +W++RI + + YF I VK F +N+ S+F
Sbjct: 144 RAGDVDSNRWIMRIFDGLKIYIVLGICLAYFLITIFLVKPVVFNENYSSWF 194
>U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical
protein F25B4.5 protein.
Length = 710
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 515 RSGVDSPSSGGYLHRASSRDENDSHRAPSERTLSEYTTMDERTRSPS 655
R S + Y +SSR DSHR +R D R RS S
Sbjct: 3 RDRSSSSDTDDYYRSSSSRKREDSHRRRDDRHRDSDRDRDRRRRSRS 49
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
protein C46A5.4 protein.
Length = 1432
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 503 HNGCSLICAPFLFVFFFSQLNHVNVTYIFK 414
H CSL+ APFL F + + HV IFK
Sbjct: 140 HATCSLLIAPFL-SFIYDDIVHVPSNRIFK 168
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 32 RRHWREITST*YINKRNIHELLFKCSASTLSCSVDY 139
R+ R+I T + EL+F+C +T +C+V Y
Sbjct: 201 RKKRRDIDKTKESVVERLRELIFQCEQTTKACTVHY 236
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 32 RRHWREITST*YINKRNIHELLFKCSASTLSCSVDY 139
R+ R+I T + EL+F+C +T +C+V Y
Sbjct: 201 RKKRRDIDKTKESVVERLRELIFQCEQTTKACTVHY 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,968,103
Number of Sequences: 27780
Number of extensions: 329065
Number of successful extensions: 1024
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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