Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14f22f
(573 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 111 5e-25
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 105 2e-23
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 101 3e-22
04_04_1523 - 34148407-34150224 31 0.86
06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725... 30 1.5
10_08_0261 + 16305388-16306104 29 2.0
07_01_0143 - 1060348-1060576,1060951-1061069,1061265-1061408 29 2.0
04_04_1001 - 30020380-30021045,30021127-30021210,30022091-300221... 29 2.6
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 29 3.5
01_06_1111 - 34599014-34599215,34599378-34599497,34599654-345997... 29 3.5
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146... 28 4.6
01_01_1174 + 9348256-9349734 28 4.6
10_08_0739 + 20217842-20218852 28 6.1
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 28 6.1
04_03_0755 + 19310648-19311603,19312420-19312633 27 8.0
02_04_0211 + 20957553-20957828,20957944-20958258,20962094-209628... 27 8.0
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 111 bits (266), Expect = 5e-25
Identities = 58/130 (44%), Positives = 82/130 (63%)
Frame = +1
Query: 160 RSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 339
RSE+M QL + +E+A V+ LGELGL+QF+DLN D + FQR FVN+V+RC EM RKL
Sbjct: 14 RSEKMCFVQLIIPAESARLAVTYLGELGLLQFKDLNEDKSPFQRIFVNQVKRCSEMSRKL 73
Query: 340 RYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNYLE 519
R+ +I + G+ P P+ ++ +LEA + EN+L E+N N+E L + Y E
Sbjct: 74 RFFNDQINKAGVKSSVRPAMQPDI----DLEELEAKLREHENDLLEMNTNSEKLLQTYNE 129
Query: 520 LTELKHILRK 549
L E K +L K
Sbjct: 130 LLEFKMVLSK 139
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 105 bits (253), Expect = 2e-23
Identities = 59/137 (43%), Positives = 82/137 (59%)
Frame = +1
Query: 154 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 333
L RSE M L Q+ + +E+A+ VS LGELGL+Q +DLN D + FQR + +++RC EM R
Sbjct: 15 LMRSEAMQLVQVIIPTESAHLTVSYLGELGLLQLKDLNADKSPFQRTYAAQIKRCGEMAR 74
Query: 334 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 513
KLR+ ++++ + GI + E + DLE +LE EL EVN N E LKR Y
Sbjct: 75 KLRFFKEQMSKAGI---STSAQLTEI--SLDFDDLEIKLGELEAELAEVNANNEKLKRTY 129
Query: 514 LELTELKHILRKTQVFF 564
EL E +L+K FF
Sbjct: 130 NELLEYSTVLQKAGEFF 146
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 101 bits (243), Expect = 3e-22
Identities = 55/135 (40%), Positives = 81/135 (60%)
Frame = +1
Query: 154 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 333
L RSE M L Q+ + +E+A+ VS LG+LGL+QF+DLN D + FQR + ++++RC EM R
Sbjct: 14 LMRSEAMQLVQVIIPAESAHLAVSYLGDLGLLQFKDLNADKSPFQRTYASQIKRCGEMAR 73
Query: 334 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 513
KLR+ +++ + I + E+ DLE +LE EL EVN N + L+R Y
Sbjct: 74 KLRFFREQMSKAAIAT-----STQFSGTSLEIDDLEVKLGELEVELTEVNANNDKLQRTY 128
Query: 514 LELTELKHILRKTQV 558
EL E +L+K V
Sbjct: 129 NELVEYNIVLQKEMV 143
>04_04_1523 - 34148407-34150224
Length = 605
Score = 30.7 bits (66), Expect = 0.86
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 172 MTLCQLFLQSEAAYA-CVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYL 348
+ LC +FL+ AA C++E+GE+ +FR L + + + + R+ E E +
Sbjct: 393 LVLCTIFLKEAAASGLCLAEIGEMMTREFRGLEEEPSKLEVVCMEARRKLAEWEPYSPVI 452
Query: 349 EKEIRRDGIPMLEIPGE 399
E+ D L++ GE
Sbjct: 453 EQGEDMDFQFSLDMLGE 469
>06_03_0852 -
25371461-25371783,25372080-25372159,25372472-25372554,
25372597-25372740,25372836-25372946,25373238-25373354,
25373436-25373562,25374160-25374296
Length = 373
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 369 VTSDLLLQVAELTFHLIAATYFIDELTLEGIY 274
V ++L + E +H IA+ YF DELT G++
Sbjct: 4 VHTELFFPLTEAEYHGIASYYFQDELTNAGVF 35
>10_08_0261 + 16305388-16306104
Length = 238
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = -3
Query: 409 LRDTLRGSPAWGCRHV*SPSPGSGAYVPSHRSDVLH*RTYVGRHLRQDSNLGTELAPTPR 230
L D L SP R V P P G SHR+ H R + RH RQ ++ P
Sbjct: 169 LCDVLHESPK--LRDVPLPPPAKGN---SHRAFQKHHRPVLRRHRRQPRQEVHQVRPDGD 223
Query: 229 ARTRRHKQLHFAGK 188
+ H++ H G+
Sbjct: 224 RHAQDHRERHATGR 237
>07_01_0143 - 1060348-1060576,1060951-1061069,1061265-1061408
Length = 163
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -3
Query: 376 GCRHV*SPSPGSGAYVPSHRSDVLH*RTYVGRHLRQDSNLGTELAPTPR 230
GC P G G + + R + L +G L Q NL T+ P PR
Sbjct: 3 GCAGSAQPGGGKGGTMCNRRKETLAQSEKIGYALEQSENLVTKSVPGPR 51
>04_04_1001 -
30020380-30021045,30021127-30021210,30022091-30022166,
30022241-30022353,30023678-30023683
Length = 314
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 426 LPGLRRFGTLSGDLQHGDAVTSDLLLQVAELTF 328
L ++ F + SGD+ H + +SD L QVA +TF
Sbjct: 20 LRDVKEFFSFSGDIVHVEMQSSDELSQVAYITF 52
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 433 DLEATFEKLENELREVNQNAEA 498
DLEA E LENEL+E ++ EA
Sbjct: 604 DLEANVESLENELQEQSKRLEA 625
>01_06_1111 -
34599014-34599215,34599378-34599497,34599654-34599760,
34600452-34600480,34600768-34600982,34601215-34601330,
34601960-34602218,34602342-34602429,34602932-34603003,
34603080-34603155,34603579-34603637,34603937-34604000,
34604104-34604232
Length = 511
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 303 IDELTLEGIYVRIQISELN*PQLPELGHAGISSFTLQEKLT 181
IDELT GI V + + L+ PQ E +AG S + E T
Sbjct: 127 IDELTKRGIQVHVMLYHLDLPQALEDEYAGWLSPRIVEDFT 167
>02_01_0224 -
1461924-1462227,1462602-1462798,1463059-1463213,
1464101-1464207,1464289-1464375,1465332-1465414,
1465959-1466027,1466332-1466658,1466744-1466957,
1467170-1467267,1467516-1467554,1467672-1468160
Length = 722
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 331 RKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLE-NELREVN 483
R++ L++E+ R M ++ EC E + R DLE ++ E LR N
Sbjct: 157 REVERLKRELNRVSKQMNDVKNECSELKKDRTRKDLEIKAKEAEIQSLRRAN 208
>01_01_1174 + 9348256-9349734
Length = 492
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 172 MTLCQLFLQ-SEAAYACVSELGELGLVQFRDLNPDVNAFQ 288
+TLC +FLQ + AA C++++G++ +F + ++A +
Sbjct: 333 LTLCTIFLQRAAAAGLCLADIGDMMTREFSAMEEGLSALE 372
>10_08_0739 + 20217842-20218852
Length = 336
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -1
Query: 456 LFEGRFKIDHLPGLRRFGTLSGDLQHGDAVTSDLLLQVAELTFHLIAATYFIDELTL 286
L GR ID ++ G L G LQ G D+ +AEL +A DE+T+
Sbjct: 251 LRRGRVFIDFEAAMQEAGELVGALQRGVLRREDVAGTLAELAAGSVAGRRCDDEITV 307
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 27.9 bits (59), Expect = 6.1
Identities = 30/137 (21%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 166 EEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRY 345
+E+TLC++ L+ + A SE+ L + + + + +A + + + + + +E K
Sbjct: 671 QELTLCKIILEEDKADR--SEMMRLS-GELQRMVQETDALKNEKDSLQKELERVEEKSSL 727
Query: 346 LEKEIRRDGIPMLEIPGECPEAPQPREMID-LEATFEKLENELREVNQNAEALKRNYLEL 522
L +++ + + + G E ++++D ++ EKL++ L E N E LK+ L
Sbjct: 728 LREKL---SMAVKKGKGLVQEREGLKQVLDEKKSDIEKLKHALDEKNAELENLKQT---L 781
Query: 523 TELKHILRKTQVFFDEM 573
+L K + +DE+
Sbjct: 782 DGNNSVLEKLKQAWDEL 798
>04_03_0755 + 19310648-19311603,19312420-19312633
Length = 389
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -3
Query: 286 GRHLRQDSNLGTELAPTPRARTRRHKQLHFAGKADIVSSPHSETKTP 146
G L D T LAP+P ++ + + F G A V+ P S P
Sbjct: 128 GPRLAIDQQPSTILAPSPTTTLQKQQGIGFGGAAAAVAPPPSPRGMP 174
>02_04_0211 +
20957553-20957828,20957944-20958258,20962094-20962801,
20963362-20963609,20963758-20964101,20964200-20964236,
20964270-20964575,20965281-20965347,20965498-20965626
Length = 809
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 FRDLNPDVNAFQR-KFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREM 429
F NP N + R +R C + +Y +R G G A R+M
Sbjct: 723 FMTQNPLYNGYPRVPQAPPLRSCISKNKYSKYKFHTVRHTGGQTFGGSGNGARADVARKM 782
Query: 430 IDLEATFEKLENELREVN 483
+++ KLENE E+N
Sbjct: 783 KEVDHLLAKLENEGVEIN 800
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,065,438
Number of Sequences: 37544
Number of extensions: 254871
Number of successful extensions: 834
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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