Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14f15f
(652 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 31 0.19
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 29 0.77
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 27 2.3
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 27 3.1
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 26 4.1
SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein Rga5|Sch... 26 4.1
SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit S8|S... 26 4.1
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 26 5.4
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 5.4
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 25 7.2
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 25 7.2
SPAC23H4.11c |cnl2||centromere localized protein Cnl2|Schizosacc... 25 9.5
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 30.7 bits (66), Expect = 0.19
Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 5/147 (3%)
Frame = -3
Query: 443 VSSTSESSQHNDHVGCVLGSIVPLEE-EVVVTGVALTNTNTVHVAPRIHWDQIGRIVPKL 267
V + ND + + G I+ ++ +V + + +NT+ P+++WD IG +
Sbjct: 606 VDRIKRTGYDNDSI-ILSGPIITEQDVDVSINRIRKEKSNTIFTVPKVNWDDIGGLEEAK 664
Query: 266 SPFLKTVADAAGMPEVAGEVQDLHS--VENG*CGVGCAFVVSQVIDHVSKKIQSVSCESF 93
+ T+ PE+ + S + G G G + V +S + S+
Sbjct: 665 TVLRDTLQLPLQFPELFSQGLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPEL 724
Query: 92 --MRLRQMFQSPANPFELRDSASPNVI 18
M + + + N FE ++SP VI
Sbjct: 725 LNMYVGESEANVRNVFEKARNSSPCVI 751
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 28.7 bits (61), Expect = 0.77
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 124 LET*SITWDTTNAQPTPHQPFSTECRS*TSPATSGIPAASATVFRNGDSLG 276
LE+ S T ++ TP +PF+++ R+ P + G PA N DSLG
Sbjct: 550 LESASSTPKISSCSSTP-KPFNSKLRAHLPPLSIGSPAVQPLANDNYDSLG 599
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 111 TLDLLRNVINHLGYNERATDSTSTILNRMQILNLACNL 224
TLD +R + LGY ER D+T R + NL +L
Sbjct: 31 TLDSMRLELQKLGYTERLDDATLLRFLRARKFNLQQSL 68
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 120 LLRNVINHLGYNERATDSTSTILNRMQILN--LACNLGHSGCISDSLQK 260
LLR ++ + + ++ T+LN MQ+LN NL C S S++K
Sbjct: 199 LLRMLVYNAHKQKFYNETLPTLLNHMQVLNEYRVSNLNEIWCNSFSIEK 247
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 4.1
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 418 CELSLVLETQTHCNIT---CSSQCTTIGSASTTVRTPLVMLYKATGRICLSFSTSCIKTL 588
C + T+ NI S+CT I + TV ML TGR+ + T K +
Sbjct: 386 CSFESLTTVTTNTNIWWVWAESRCTEIPESKRTVFPNCTMLIDKTGRLIILQQTVPQKPV 445
Query: 589 RLFAPATEVK 618
L A + + K
Sbjct: 446 ALTASSNKRK 455
>SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein
Rga5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 45 QLEWIRRRLEHLPQAHEAFTAYTLDLLRNVINHLGYNERATDSTSTI 185
++E RRR++ LP + Y LDLL + N D+ + I
Sbjct: 163 RVEMYRRRIDELPIPNRQLLLYLLDLLSVFAMNSSKNLMTADNLAAI 209
>SPCC736.10c |mrps8||mitochondrial ribosomal protein subunit
S8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 152
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 123 LRNVINHLGYNERATDSTSTILNRMQILNLACNLGHSGCISDSLQK 260
L V +HL + RA S +++ N +L L L H G +S S+Q+
Sbjct: 3 LHYVFSHLQNSFRARKSLASVPNCNSVLELCAVLYHQGFLS-SIQR 47
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 5.4
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 52 NGFAGDWNICLKRMKLSQLTLWIFLET*SITWDTTNAQPTPHQPFSTECRS*TSPATSGI 231
N F DWN +K+ L LE S D P P+Q ++T S TS +
Sbjct: 361 NSFLLDWNENVKKNDTYYDILHAILEDLSKHQDDIAPYPNPYQNYTT---SNTSVVNAFE 417
Query: 232 PAASATVFRNGDSLGTIRPIW 294
P + + G+ I P+W
Sbjct: 418 PYDTIDLVDGGEDRENI-PLW 437
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 5.4
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 52 NGFAGDWNICLKRMKLSQLTLWIFLET*SITWDTTNAQPTPHQPFSTECRS*TSPATSGI 231
N F DWN +K+ L LE S D P P+Q ++T S TS +
Sbjct: 361 NSFLLDWNENVKKNDTYYDILHAILEDLSKHQDDIAPYPNPYQNYTT---SNTSVVNAFE 417
Query: 232 PAASATVFRNGDSLGTIRPIW 294
P + + G+ I P+W
Sbjct: 418 PYDTIDLVDGGEDRENI-PLW 437
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 438 RDTNSLQHYMF-QSMHNDRIRIHDRTNAFS 524
+D N +F + +HN +RIH+R+ A S
Sbjct: 329 KDPNHQSQRLFLEDVHNTYVRIHERSAAIS 358
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 418 SITTMSAVFWEALYRSKRKL*SLEL 344
SI T+S+VFW LYR + SL L
Sbjct: 1969 SIYTVSSVFWWYLYRMLPSVASLSL 1993
>SPAC23H4.11c |cnl2||centromere localized protein
Cnl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 249 SLQKWRQFRNNPTNLVPVNSRRYVYCVGVRQ 341
SL++WRQ P+ R Y YC RQ
Sbjct: 23 SLEQWRQLFPQRYREDPLIERLYEYCTQQRQ 53
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,680,100
Number of Sequences: 5004
Number of extensions: 55357
Number of successful extensions: 163
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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