Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14f13f
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    26   0.83 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.1  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.5  
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    24   4.4  
AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal ...    24   4.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   5.8  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 26.2 bits (55), Expect = 0.83
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +2

Query: 530 DTDDEALVIDDDEPQDEL 583
           +T+D A+V D+ EP+D+L
Sbjct: 42  ETEDAAVVADETEPEDDL 59


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 494  SNGGQDANGTVSDTDDEALVIDDDEPQDE 580
            SNGG+D N    D DDE    DDD+  D+
Sbjct: 1817 SNGGEDGNED-DDEDDE----DDDDDDDD 1840


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 446 KPKENGNDVRNGTETPSNGGQDANGTVSDTDDEA 547
           K  + G D R+G E  SN  +  NG   D  D +
Sbjct: 535 KKDDKGYDRRSGKEERSNDNRYTNGADRDRGDRS 568


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 146 IMSQKVTRKGAIGEEKEKRQTDSPAKDVKKKTTNAEKDKQTTSEKPE 286
           ++S     + +   EKE+  T++   D   +  N EKD  +  +KP+
Sbjct: 12  LLSVVCCEEASTAAEKEQATTEASDSDEAAEQPNVEKD-DSPKDKPD 57


>AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal
           carrier protein AP-2 protein.
          Length = 87

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 QTDSPAKDVKKKTTNAEKDKQTTSEKPE 286
           QTD+ AKD  K  T+  KDK    + P+
Sbjct: 19  QTDA-AKDAAKDATDKVKDKAALPDAPK 45


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 152  SQKVTRKGAIGEEKEKRQTDSPAKDVKKKTTNAEKDKQTTSE 277
            S+K  +KGA G +K++++        K+K     K   +TSE
Sbjct: 979  SRKRKKKGASGGQKKRQKAMDEGLSQKQKGRILSKATVSTSE 1020


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,745
Number of Sequences: 2352
Number of extensions: 8555
Number of successful extensions: 64
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)