Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14f10f
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 184 3e-47
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 184 3e-47
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 155 2e-38
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 118 2e-27
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 87 7e-18
AF003151-12|AAK18912.1| 149|Caenorhabditis elegans Ribosomal pr... 28 5.9
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 27 7.7
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 184 bits (449), Expect = 3e-47
Identities = 87/145 (60%), Positives = 112/145 (77%)
Frame = +3
Query: 144 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 323
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 324 EEILHSRGLNHEYAPISGEATYTDALAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLE 503
E + + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 504 FITKHYAKAKEIWLPTPTWGNHPQI 578
F++K YAK K I+ PTPTWGNH I
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPI 152
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 184 bits (449), Expect = 3e-47
Identities = 87/145 (60%), Positives = 112/145 (77%)
Frame = +3
Query: 144 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 323
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 324 EEILHSRGLNHEYAPISGEATYTDALAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLE 503
E + + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 504 FITKHYAKAKEIWLPTPTWGNHPQI 578
F++K YAK K I+ PTPTWGNH I
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPI 152
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 155 bits (376), Expect = 2e-38
Identities = 70/134 (52%), Positives = 99/134 (73%)
Frame = +3
Query: 168 WWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 347
W+ NV + P D ILG+TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ +
Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81
Query: 348 LNHEYAPISGEATYTDALAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAK 527
++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K +
Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140
Query: 528 AKEIWLPTPTWGNH 569
+K ++ PTPTW NH
Sbjct: 141 SKTLFYPTPTWANH 154
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 118 bits (285), Expect = 2e-27
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Frame = +3
Query: 165 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 341
++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 342 RGLNHEYAPISGEATYTDALAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 521
LNHEY P+ G + A +L G +SP IK + VQ LSGTGALR G EF+
Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120
Query: 522 AKAKEIWLPTPTWGNH 569
K +++ PTWGNH
Sbjct: 121 CNMKTVYVSNPTWGNH 136
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 87.4 bits (207), Expect = 7e-18
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +3
Query: 165 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 341
++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 342 RGLNHEYAPISGEATYTDALAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 521
NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ +
Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122
Query: 522 AKAKEIWLPTP 554
K I++ P
Sbjct: 123 LSMKTIYVSNP 133
>AF003151-12|AAK18912.1| 149|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 10 protein.
Length = 149
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 402 LKHQYMWPHH*WEHTHG*VLYCEEFL 325
+K Q+ W H+ W T +LY E+L
Sbjct: 56 VKEQFAWRHYYWYLTDAGILYLREYL 81
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 210 GITEAYKKDTHPKKVNLGVGAYRDDEG 290
GI A +++ HP KV G+G + D G
Sbjct: 910 GIEVAVRRNVHPPKVLTGIGIHSPDGG 936
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,296,710
Number of Sequences: 27780
Number of extensions: 308584
Number of successful extensions: 754
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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