Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14f08f
(434 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-33|AAK68575.1| 83|Caenorhabditis elegans Hypothetical... 32 0.21
AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical ... 29 1.5
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 2.5
AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxi... 28 3.4
AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxi... 28 3.4
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 27 5.9
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 27 7.8
>AC084158-33|AAK68575.1| 83|Caenorhabditis elegans Hypothetical
protein Y69A2AR.3 protein.
Length = 83
Score = 31.9 bits (69), Expect = 0.21
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 263 YKVPEYFCYDNVSFFEAEIEMAKYRLPQPS 352
YK EY +D S+ AEI M K R+ QPS
Sbjct: 42 YKCDEYLKFDKYSYAHAEITMNKDRVVQPS 71
>AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical
protein C03H5.6 protein.
Length = 530
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 350 KVVAIGTSPSQFQLRRSSHYHNRNILELCTLRFFLDPHR 234
K+V + + P F +RR+ ++ N +E RFF DP++
Sbjct: 395 KIVTMTSIPKAFNIRRTQNFDFENKIE--RFRFFSDPNK 431
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 215 ASQPVGPGVDPKKTG-AYKVPEYFCYD 292
A QP PG D + G YK PE FC+D
Sbjct: 113 AGQPGAPGADADEQGFHYKAPE-FCFD 138
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 215 ASQPVGPGVDPKKTG-AYKVPEYFCYD 292
A QP PG D + G YK PE FC+D
Sbjct: 113 AGQPGAPGADADEQGFHYKAPE-FCFD 138
>AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform c protein.
Length = 353
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 186 LTSGIVEFVGGEEKLGLSFCVEPSL*NRVAMRSVLLFSTPNLFILLHNRIIAFTSPILNH 7
+TSG VE E K G C+ P +R L FS PN++ +L + + F I+
Sbjct: 177 ITSGTVEECTEELKEGNLLCIAPG-----GVREAL-FSDPNVYDILWGKRLGFAKVIIGS 230
Query: 6 R 4
+
Sbjct: 231 K 231
>AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform a protein.
Length = 387
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 186 LTSGIVEFVGGEEKLGLSFCVEPSL*NRVAMRSVLLFSTPNLFILLHNRIIAFTSPILNH 7
+TSG VE E K G C+ P +R L FS PN++ +L + + F I+
Sbjct: 177 ITSGTVEECTEELKEGNLLCIAPG-----GVREAL-FSDPNVYDILWGKRLGFAKVIIGS 230
Query: 6 R 4
+
Sbjct: 231 K 231
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 281 FCYDNVSFFEAEIEMAKYRLPQPS 352
F Y+NV++ +AE Y P+P+
Sbjct: 1521 FSYENVAYTQAEFSSTTYACPEPT 1544
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 281 FCYDNVSFFEAEIEMAKYRLPQPS 352
F Y+NV++ +AE Y P+P+
Sbjct: 1521 FSYENVAYTQAEFSSTTYACPEPT 1544
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = -3
Query: 84 LLFSTPNLFILLHNRIIAFTSPILNHR 4
+LF+ P L +LLH+ +IAF++P + HR
Sbjct: 1 MLFTLP-LLLLLHS-VIAFSTPEVQHR 25
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 194 SSAVIHPASQPVGPGVDPKKTGAYKVPEYFC 286
S +V QP PG DP+K A+K + C
Sbjct: 146 SESVDEDNEQPPEPGSDPRKIWAFKAAKMKC 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,940,845
Number of Sequences: 27780
Number of extensions: 197939
Number of successful extensions: 471
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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