Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14f07f
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 29 0.64
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 28 1.1
SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster... 27 3.4
SPAC15E1.10 ||SPAP7G5.01|PI31 proteasome regulator related|Schiz... 27 3.4
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 4.5
SPAC25B8.12c |||nucleotide-sugar phosphatase |Schizosaccharomyce... 26 4.5
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 5.9
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.9
SPBC17A3.02 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.9
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 25 7.9
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 25 7.9
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 7.9
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 29.1 bits (62), Expect = 0.64
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 224 AHCIIDDAVGVWRVRVG-STWGNSGGVVHH-VNRHIIHPNYGRWSRDNDIAIM 376
A C DD + VW + G +T G ++H+ +HP + S D+D+ ++
Sbjct: 262 ASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHPCMIQPSMDSDVFVL 314
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 110 TTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDD 244
TT+ + + L +T W +W+ G+ IL++ + + +I D
Sbjct: 136 TTVYQISVVLLLCLTMGWKSWTSASGAVILSSSTRMLPVFMVIWD 180
>SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -2
Query: 592 CDGITTIPRPADALVYDPDLDVTKLLRE*AAEPSDSPASRPNHLVVAQVV 443
C+G T PRP+ + V+ LL E A + P L Q V
Sbjct: 73 CEGYTHFPRPSGTFTASRRIPVSSLLSEPAPHGLAGQPTHPTFLYYIQSV 122
>SPAC15E1.10 ||SPAP7G5.01|PI31 proteasome regulator
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 265
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 272 GSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTS 385
GS GN GG++ N I HP SR+ + RT+
Sbjct: 175 GSDMGNDGGMIPTFNHPIFHPE--NRSRNEQASANRTN 210
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +2
Query: 218 TAAHCIIDDAVGVWRVRVGSTWGNSGGVVHHVNRHII 328
T+A C+ + +W++R +T+G H +N+ +I
Sbjct: 1347 TSAQCVTE-IWNLWKLRTKATFGGQHDFQHCINKRLI 1382
>SPAC25B8.12c |||nucleotide-sugar phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 26.2 bits (55), Expect = 4.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 603 FALAGWTLAVATHAPVTLE 659
FA+AGW++A+ P+ +E
Sbjct: 249 FAIAGWSVAIKNGMPIAIE 267
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 408 MLCNRPAFLDQTTTWATTRWFGRLAG---ESLGSAAHSLSNF 524
++C+RP + TTW F R+ G ESL + S SN+
Sbjct: 47 IVCSRPIVDENVTTWPENEGF-RIEGTLLESLVESVTSASNY 87
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 101 GSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVG 253
G TT+ N++P+ + + + + ++C + I N +V T + +ID + G
Sbjct: 114 GPTTSKNKHPSHSNTIRSPPYKVKKESCHTEINNVSNVSTESINVIDASRG 164
>SPBC17A3.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 119
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 572 YGGNTITNNMLCAGWLDVGGRDSCTGD 652
YGG + +LC G+ +GG +GD
Sbjct: 40 YGGPFVPGCLLCGGFNAIGGLAIASGD 66
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 491 TRFGGSLSEQLRHVQVWVVNQSVCRSR 571
+ FGGSL + H + W +C+SR
Sbjct: 818 SNFGGSLHFEYHHEKYWPQLVELCKSR 844
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/78 (20%), Positives = 38/78 (48%)
Frame = -3
Query: 264 TRQTPTASSMIQCAAVKTDRLLRIELPQFWDQVLQFLVISRAAIVGYRFIVVVLPPTILR 85
++QT + +M + A +K+DR P+ ++ L + + G + ++PP++ R
Sbjct: 147 SKQTFDSENMGEHAWLKSDR--DYYYPELLNRFFTLLRTNNPELAGEKRKYTIVPPSVHR 204
Query: 84 DGAAEMAVKAVRLNARMN 31
+G + ++ RM+
Sbjct: 205 EGKKTIFANISDISKRMH 222
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 598 HALRWLAGRWRSRL 639
HAL WLAG W +++
Sbjct: 65 HALFWLAGEWNTKV 78
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,958,837
Number of Sequences: 5004
Number of extensions: 61388
Number of successful extensions: 186
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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