Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14f02f
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,...   124   7e-29
AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,...   124   7e-29
BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p pro...   122   4e-28
BT003778-1|AAO41459.1|  278|Drosophila melanogaster RE04224p pro...    28   8.6  
AE013599-2441|AAF57885.2|  278|Drosophila melanogaster CG10953-P...    28   8.6  

>AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,
           isoform B protein.
          Length = 230

 Score =  124 bits (300), Expect = 7e-29
 Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
 Frame = +3

Query: 258 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXX 434
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+    
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAG 77

Query: 435 XXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRT 611
                         F+ SMSA+A+VLA+AKIEIKL++IPEGKSVTFKWRGKPLFIRHRT
Sbjct: 78  AVGGAYAAKGLVNTFIGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRT 136


>AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,
           isoform A protein.
          Length = 260

 Score =  124 bits (300), Expect = 7e-29
 Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
 Frame = +3

Query: 258 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXX 434
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+    
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAG 77

Query: 435 XXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRT 611
                         F+ SMSA+A+VLA+AKIEIKL++IPEGKSVTFKWRGKPLFIRHRT
Sbjct: 78  AVGGAYAAKGLVNTFIGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRT 136


>BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p
           protein.
          Length = 260

 Score =  122 bits (294), Expect = 4e-28
 Identities = 63/119 (52%), Positives = 82/119 (68%), Gaps = 1/119 (0%)
 Frame = +3

Query: 258 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIXXXX 434
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+    
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLMVGAG 77

Query: 435 XXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRT 611
                         F+ SMSA+A+VLA+AKIEIKL++IPEGKSVTFKWRGKPLFIRH T
Sbjct: 78  AVGGAYAAKGLVNTFIGSMSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHST 136


>BT003778-1|AAO41459.1|  278|Drosophila melanogaster RE04224p
           protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +3

Query: 111 APYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVP 290
           AP ++ +   V       VV+P P+   VV+P P  + V  +    P++     A   +P
Sbjct: 39  APVYQPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPV-VIPAPAPVKTYVPPAPISIP 97

Query: 291 AQV 299
           A V
Sbjct: 98  APV 100


>AE013599-2441|AAF57885.2|  278|Drosophila melanogaster CG10953-PA
           protein.
          Length = 278

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +3

Query: 111 APYFKSSTQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVP 290
           AP ++ +   V       VV+P P+   VV+P P  + V  +    P++     A   +P
Sbjct: 39  APVYQPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPV-VIPAPAPVKTYVPPAPISIP 97

Query: 291 AQV 299
           A V
Sbjct: 98  APV 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,028,044
Number of Sequences: 53049
Number of extensions: 538354
Number of successful extensions: 1488
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)