BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14f01f
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 38 0.037
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 34 0.45
AB075867-1|BAB85573.1| 357|Homo sapiens KIAA1987 protein protein. 33 0.79
BC071853-1|AAH71853.1| 356|Homo sapiens GREB1 protein protein. 33 1.0
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 33 1.0
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 33 1.0
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 33 1.0
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 31 2.4
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 3.2
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 4.2
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 31 4.2
U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein. 30 5.6
AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens ... 30 5.6
BC032587-1|AAH32587.1| 442|Homo sapiens tubby like protein 3 pr... 30 7.4
AF045583-1|AAC95431.1| 442|Homo sapiens tubby like protein 3 pr... 30 7.4
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 37.5 bits (83), Expect = 0.037
Identities = 27/96 (28%), Positives = 47/96 (48%)
Frame = -3
Query: 588 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 409
S+ +S+ D + + S SSD +D+D D S S S+D SS S ++++
Sbjct: 221 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSD 280
Query: 408 NADFSFSGTXXXXXXXXNSGNSQD*VESGADVADTT 301
++D S S +S NS D +S +D +D++
Sbjct: 281 SSDSSDSSNSSDSSDSSDSSNSSDSSDS-SDSSDSS 315
Score = 33.5 bits (73), Expect = 0.60
Identities = 27/116 (23%), Positives = 51/116 (43%)
Frame = -3
Query: 588 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 409
S S+ D + + D ++S SSD +DN + S + S+ SS S D++
Sbjct: 165 SKSESDSSDSDSKSDSSDSN-SSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSN 223
Query: 408 NADFSFSGTXXXXXXXXNSGNSQD*VESGADVADTTQMQGAEVISLDVSHAAREVN 241
++D S S +S +S D +D +D++ ++ S + S ++ N
Sbjct: 224 SSDSSDSSDSSNSSESSDSSDSSD--SDSSDSSDSSNSNSSDSDSSNSSDSSDSSN 277
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 546 DIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTXXXXX 367
D +NS SSD +D+D S S S+D SS S+ D++ ++D S S
Sbjct: 94 DSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSD-SSDSSNSSDSSDSSDSSDSS 152
Query: 366 XXXNSGNSQ-D*VESGADVADT 304
+S +S+ D +S +D +D+
Sbjct: 153 DSSDSSDSKSDSSKSESDSSDS 174
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 33.9 bits (74), Expect = 0.45
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -3
Query: 588 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 409
S S+ D + + D ++S SSD +DN + S + S+ SS S D++
Sbjct: 627 SKSESDSSDSDSKSDSSDSN-SSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSS 685
Query: 408 NADFSFSGTXXXXXXXXNSGNSQD*VESG-ADVADTTQMQGAEVISLDVSHAA 253
++D S S NS S D +S +D +D++ + D S+++
Sbjct: 686 SSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSS 738
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = -3
Query: 588 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 409
S+ +S+ D + + S SSD +D+D D S S S+D SS S D+++
Sbjct: 689 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSD 748
Query: 408 NADFSFSGTXXXXXXXXNSGNSQD 337
+++ S S +S +S D
Sbjct: 749 SSNSSDSSDSSDSSNSSDSSDSSD 772
Score = 32.7 bits (71), Expect = 1.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = -3
Query: 588 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 409
S+ +S+ D D ++S SSD +D+D D S S + SS S D+++
Sbjct: 826 SSNSSDSSDSSNSSDSSDSSDSSDSSDSDSSNRSDSSNSSDS----SDSSDSSNSSDSSD 881
Query: 408 NADFSFSGTXXXXXXXXNSGNSQD 337
++D S S +S NS D
Sbjct: 882 SSDSSDSNESSNSSDSSDSSNSSD 905
Score = 32.3 bits (70), Expect = 1.4
Identities = 25/96 (26%), Positives = 43/96 (44%)
Frame = -3
Query: 588 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 409
S+ +S D D ++S SSD +D+ S S+ SSGS D+++
Sbjct: 1015 SSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSGSSDSSDSSD 1074
Query: 408 NADFSFSGTXXXXXXXXNSGNSQD*VESGADVADTT 301
++D S S +S S D +S +D +D++
Sbjct: 1075 SSDSSDSSDSSDSSDSSDSSESSDSSDS-SDSSDSS 1109
Score = 31.1 bits (67), Expect = 3.2
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 546 DIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTXXXXX 367
D +NS SSD +D+D S S S+D SS S+ D++ ++D S S
Sbjct: 556 DSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSD-SSDSSNSSDSSDSSDSSDSS 614
Query: 366 XXXNSGNSQ-D*VESGADVADT 304
+S +S+ D +S +D +D+
Sbjct: 615 DSSDSSDSKSDSSKSESDSSDS 636
>AB075867-1|BAB85573.1| 357|Homo sapiens KIAA1987 protein protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.79
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = -1
Query: 611 SRKLLTAGPTSRPK-RLIWRLDL--TSPIVIAAPMSLTMMLSARETEAVASATTFSRASP 441
SR L GPTS+ + R ++D + +++A +S + M A+ + FS
Sbjct: 81 SRGLKRRGPTSKKEPRKRRKVDEAPSEDLLVAMALSRSEMEPGAAVPALRLESAFSERIR 140
Query: 440 PEAKDLRTRLKMRISPSAEPVIVTTDAETLG 348
PEA++ + K +SP P+++ D+ET G
Sbjct: 141 PEAENKSRKKKPPVSP---PLLLVQDSETTG 168
>BC071853-1|AAH71853.1| 356|Homo sapiens GREB1 protein protein.
Length = 356
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 299 KCRELKSSALTSVTRPEKLMMSDAPGGLQEPA--*PSRRRGSAALNNSPISLNKFEITMS 126
KC++L + L ++ RP L S PG +PA R G A P+SL + ++
Sbjct: 275 KCQQLAKNNLLALPRPSALGSSACPGRPGDPALLWAKARGGMGAAGLGPLSLLESDVASM 334
Query: 125 RMR 117
R+R
Sbjct: 335 RVR 337
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 32.7 bits (71), Expect = 1.0
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 599 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 423
L+ PTS P ++W LT ++AP + L + E SR SPP A L
Sbjct: 910 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 969
Query: 422 R 420
+
Sbjct: 970 K 970
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 32.7 bits (71), Expect = 1.0
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 599 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 423
L+ PTS P ++W LT ++AP + L + E SR SPP A L
Sbjct: 637 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 696
Query: 422 R 420
+
Sbjct: 697 K 697
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 32.7 bits (71), Expect = 1.0
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 599 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 423
L+ PTS P ++W LT ++AP + L + E SR SPP A L
Sbjct: 910 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 969
Query: 422 R 420
+
Sbjct: 970 K 970
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 31.5 bits (68), Expect = 2.4
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Frame = -1
Query: 596 TAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRT 417
T TS P +TS I+AP + T S +T ++S TT + +P + T
Sbjct: 748 TTNTTSAPTTSTTSAPITS--TISAPTTSTT--STPQTSTISSPTTSTTPTPQTS----T 799
Query: 416 RLKMRISPSAEPVIVTTDA---ETLGTARTKLSRVPT*LTRRKCRELKSSALTSVTRPEK 246
S ++ P TT A T T +T +S PT T SA T+ T
Sbjct: 800 TSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTASTISAPTTSTTSFH 859
Query: 245 LMMSDAPGGLQEPA*PSRRRGSAALNNS 162
+ +P + P + SAA +++
Sbjct: 860 TTSTTSPPTSSTSSTPQTSKTSAATSST 887
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.1 bits (67), Expect = 3.2
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = -1
Query: 527 AAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPVIVTTDAETLG 348
++ + T ++ T A+ +T + +S PE T L + + V T + T G
Sbjct: 1189 SSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPG 1248
Query: 347 TARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAP 225
TA T ++VPT T SS T++T P + + P
Sbjct: 1249 TAHT--TKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTP 1287
Score = 30.7 bits (66), Expect = 4.2
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = -1
Query: 527 AAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPVIVTTDAETLG 348
++ + T ++ T A+ +T + +S PE T L + + V T + T G
Sbjct: 3143 SSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTPG 3202
Query: 347 TARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAP 225
TA T ++VPT T SS T++T P + + P
Sbjct: 3203 TAHT--TKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTP 3241
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.7 bits (66), Expect = 4.2
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = -1
Query: 527 AAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPVIVTTDAETLG 348
++ + T ++ T A+ +T + +S PE T L + + V T + T G
Sbjct: 358 SSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPG 417
Query: 347 TARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAP 225
TA T ++VPT T SS T++T P + + P
Sbjct: 418 TAHT--TKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTP 456
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 30.7 bits (66), Expect = 4.2
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = -1
Query: 527 AAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPVIVTTDAETLG 348
++ + T ++ T A+ +T + +S PE T L + + V T + T G
Sbjct: 616 SSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPG 675
Query: 347 TARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAP 225
TA T ++VPT T SS T++T P + + P
Sbjct: 676 TAHT--TKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTP 714
>U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein.
Length = 328
Score = 30.3 bits (65), Expect = 5.6
Identities = 37/150 (24%), Positives = 59/150 (39%)
Frame = -1
Query: 527 AAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPVIVTTDAETLG 348
++ + T ++ T A+ +T + +S PE T L + + V T + T G
Sbjct: 106 SSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPG 165
Query: 347 TARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAPGGLQEPA*PSRRRGSAALN 168
TA T ++VPT T SS T+ T P + + P PS G+
Sbjct: 166 TAHT--TKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSIPGT---T 220
Query: 167 NSPISLNKFEITMSRMR*ELGSKSTSRCGT 78
++P L T++ S ST GT
Sbjct: 221 HTPTVLTTTTTTVATGSMATPSSSTQTSGT 250
>AK092754-1|BAC03965.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ35435 fis, clone SMINT2002620. ).
Length = 615
Score = 30.3 bits (65), Expect = 5.6
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 479 AVASATTFSRASPPEAKDLRTRLKMRISPSAEPVIVTTDAETLGTARTKLSRVP 318
A ++F R S DLRT R+ P +TD++ LG+ RTK R P
Sbjct: 259 AFLKKSSFKRKSTSNLADLRTAHDARV-PQRTLSSSSTDSQKLGSGRTKRWRSP 311
>BC032587-1|AAH32587.1| 442|Homo sapiens tubby like protein 3
protein.
Length = 442
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 85 HRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASDIINFSGRVT 264
H+ + ++P + D ++S N E L + A W+ S ++NF GRVT
Sbjct: 332 HKQIPYQPQNNH--DSLLSRWQNRTMENL-----VELHNKAPVWNSDTQSYVLNFRGRVT 384
Query: 265 DVKADDFSSLHLRRVSYV 318
+F +H Y+
Sbjct: 385 QASVKNFQIVHKNDPDYI 402
>AF045583-1|AAC95431.1| 442|Homo sapiens tubby like protein 3
protein.
Length = 442
Score = 29.9 bits (64), Expect = 7.4
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 85 HRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASDIINFSGRVT 264
H+ + ++P + D ++S N E L + A W+ S ++NF GRVT
Sbjct: 332 HKQIPYQPQNNH--DSLLSRWQNRTMENL-----VELHNKAPVWNSDTQSYVLNFRGRVT 384
Query: 265 DVKADDFSSLHLRRVSYV 318
+F +H Y+
Sbjct: 385 QASVKNFQLVHKNDPDYI 402
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,403,613
Number of Sequences: 237096
Number of extensions: 1460910
Number of successful extensions: 3769
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3768
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -