Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14e22r
(744 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 33 0.043
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.099
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.6
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 27 2.8
SPAC521.02 |||WLM domain protein|Schizosaccharomyces pombe|chr 1... 27 2.8
SPAC922.03 |||1-aminocyclopropane-1-carboxylate deaminase |Schiz... 27 2.8
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 27 2.8
SPCC18.11c |sdc1||Dpy-30 domain protein|Schizosaccharomyces pomb... 26 4.9
SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|ch... 26 6.5
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 26 6.5
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 25 8.6
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 33.1 bits (72), Expect = 0.043
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1
Query: 249 EGFHHRGGRCWPITGL 202
EGFHHR R WPIT L
Sbjct: 266 EGFHHRASRYWPITNL 281
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.9 bits (69), Expect = 0.099
Identities = 20/81 (24%), Positives = 33/81 (40%)
Frame = +2
Query: 440 TQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQS 619
T + ST PP + T P+L T S T+ S+P T +P P + +
Sbjct: 362 TSTSSTSTPPPPASTSSTGTSSSPLLSTST-SCTTSTSIPPTGNSTTPVTPTVPPTSSST 420
Query: 620 PSTAIRSSGQVQ*PWPASSLT 682
P T + P+ ++ +T
Sbjct: 421 PLTTTNCTTSTSVPYTSTPVT 441
Score = 30.3 bits (65), Expect = 0.30
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +2
Query: 440 TQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQS 619
T + ST P T + T P+ T S T+ S+P T +P P T S
Sbjct: 254 TSTSSTSIPIPPTSTSSTDTNSSPLPTTST-SCTTSTSIPPTGNSTTPVTPTVPPTSTSS 312
Query: 620 PST-----AIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSP 739
ST + S+G P P++S + S+S ST+ V+P
Sbjct: 313 TSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTP 357
Score = 30.3 bits (65), Expect = 0.30
Identities = 31/96 (32%), Positives = 39/96 (40%)
Frame = +2
Query: 440 TQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQS 619
T + ST PP + T P+ T S T+ S+P T +P P T S
Sbjct: 308 TSTSSTSTPPPPASTSSTGTSSSPLPSTST-SCTTSTSIPPTGNSTTPVTPTVPPTSTSS 366
Query: 620 PSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTS 727
ST P PAS+ + SSSP S STS
Sbjct: 367 TSTP---------PPPASTSSTGTSSSPL-LSTSTS 392
Score = 28.3 bits (60), Expect = 1.2
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 440 TQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQS 619
T ++ +PP G+ ST P+ P+ ++ S+P T +NPL T
Sbjct: 113 TSCTTSTSIPPTGGSSSLST---PITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT-- 167
Query: 620 PSTAIRSSGQVQ*PWPASSLTHWISSS-PARQSLSTS 727
ST+ +S + +SSL+ I+ + P + STS
Sbjct: 168 TSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTS 204
Score = 26.2 bits (55), Expect = 4.9
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLV-T 613
+T S ST PP T + S+ + + S+P +S AS + + T
Sbjct: 682 VTTSSSTVSTPPPTTSFPST------FTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKT 735
Query: 614 QSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSP 739
S S+ SS PASS + SS +RQS S+S +P
Sbjct: 736 ASTSSGSSSSSSYT---PASSTSTTTSSVSSRQSSSSSSFTP 774
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.6
Identities = 29/102 (28%), Positives = 44/102 (43%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQ 616
IT S PIT + +T P+ + TA + S + ++P T+ V
Sbjct: 3060 ITSSSVLNSSTPITSSTALNTST-PITSSSVLNSSTAIT---SSSIVNSSTPITSSSVLN 3115
Query: 617 SPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
S STAI SS + P +S + SS+P S + +PI
Sbjct: 3116 S-STAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPI 3156
Score = 26.6 bits (56), Expect = 3.7
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQ--KSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QAS-PRTNPL 607
IT S PIT + SST P+ T S S P S T S P T+
Sbjct: 3120 ITSSSILNSSTPITSSSILNSST---PI----TSSTVVNSSTPITSSTTLNTSTPITSSS 3172
Query: 608 VTQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
V S STAI SS V P +S + SS+P S + + +PI
Sbjct: 3173 VLNS-STAITSSSIVNSSTPITSSSVLNSSTPITSSTTLNTSTPI 3216
Score = 26.2 bits (55), Expect = 4.9
Identities = 30/102 (29%), Positives = 43/102 (42%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQ 616
IT S PIT + +T P+ + TA + S ++P T+ V
Sbjct: 984 ITSSSVLNSSTPITSSSVLNTST-PITSSSVLNSSTAIT---SSTALNTSTPITSSSVLN 1039
Query: 617 SPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
S ST I SS V P +S T SS+P S + + +PI
Sbjct: 1040 S-STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPI 1080
Score = 26.2 bits (55), Expect = 4.9
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQ--KSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLV 610
IT S + PIT + SST P+ T S S P S SP
Sbjct: 1608 ITSSTALNTSTPITSSSVLNSST---PI----TSSTVLNSSTPITSSTALNTSPPITSST 1660
Query: 611 TQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
+ ST I SS V P +S T SS+P S + + +PI
Sbjct: 1661 VVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPI 1704
Score = 26.2 bits (55), Expect = 4.9
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQ--KSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLV 610
IT S PIT + SST P+ V T+ S+ S L ++P T+ V
Sbjct: 2388 ITSSTVVNTSTPITSSSVLNSST---PITSSTV--VNTSTSITSSSVLN-SSTPITSSSV 2441
Query: 611 TQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
S ST I SS V P +S + SS+P S + + +PI
Sbjct: 2442 LNS-STPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPI 2484
Score = 26.2 bits (55), Expect = 4.9
Identities = 29/102 (28%), Positives = 43/102 (42%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQ 616
IT S PIT + +T P+ + TA + S ++P T+ V
Sbjct: 3288 ITSSTVVNSSTPITSSTTLNTST-PITSSSVLNSSTAIT---SSTALNTSTPITSSSVLN 3343
Query: 617 SPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
S STAI SS + P +S + SS+P S + +PI
Sbjct: 3344 S-STAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPI 3384
Score = 25.4 bits (53), Expect = 8.6
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQ--KSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLV 610
IT S PIT + SST P+ + ++ T+ + S L ++P T+ V
Sbjct: 420 ITSSSILNSSTPITSSTVLNSST---PITS--STALNTSTPITSSSVLN-SSTPITSSSV 473
Query: 611 TQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
S ST I SS V P +S T SS+P S + + +PI
Sbjct: 474 LNS-STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPI 516
Score = 25.4 bits (53), Expect = 8.6
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAF---SVP-EHSRLT*QASPRTNP 604
IT S PIT SST VL TP ++ S P S + ++P T+
Sbjct: 2220 ITSSTVVNSSTPIT----SST----VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSS 2271
Query: 605 LVTQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
V S ST I SS V P +S T SS+P S + + +PI
Sbjct: 2272 TVVNS-STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPI 2316
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 584 ASPRTNPLVTQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
++P T+ V + ST I SS V P +SLT SS+P S + +PI
Sbjct: 2541 STPITSSTVVNT-STPITSSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPI 2592
Score = 25.4 bits (53), Expect = 8.6
Identities = 29/102 (28%), Positives = 45/102 (44%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQKSSTCW*PVLQEHTPSVQTAFSVPEHSRLT*QASPRTNPLVTQ 616
IT S PIT + +T P+ + ++ T+ + S L ++P T+ V
Sbjct: 2748 ITSSSVLNSSTPITSSTVVNTST-PITS--STALNTSTPITSSSVLN-SSTPITSSTVVN 2803
Query: 617 SPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
+ ST I SS V P +S T SS+P S + +PI
Sbjct: 2804 T-STPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPI 2844
Score = 25.4 bits (53), Expect = 8.6
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Frame = +2
Query: 437 ITQSESTEQVPPITGAQ--KSSTCW*P--VLQEHTPSVQTAF---SVP-EHSRLT*QASP 592
IT S + PIT + SST VL TP ++ S P S + ++P
Sbjct: 3204 ITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTP 3263
Query: 593 RTNPLVTQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
T+ V S ST I SS V P +S T SS+P S + + +PI
Sbjct: 3264 ITSSSVLNS-STPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPI 3312
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 585 ACQVSLECSGTENAVCTDGVCSCNTGYQQVDDF 487
AC + SG+ NAVC SC+ + VD F
Sbjct: 48 ACLTCQKASGSLNAVCYSCSISCHADHDLVDLF 80
>SPAC521.02 |||WLM domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 283
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 234 CGGSPPRMRRLRRDTHPRSLKLEYIARSRYK 326
CGGS R +++RR P S K + R+ K
Sbjct: 192 CGGSLQRKKKIRRKPTPSSTKKRKLTRTGQK 222
>SPAC922.03 |||1-aminocyclopropane-1-carboxylate deaminase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 338
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 691 DPVRQGRSRPGLLHLSRGSD 632
DPV +G+S GL+HL R ++
Sbjct: 291 DPVYEGKSMQGLIHLVRNNE 310
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 584 ASPRTNPLVTQSPSTAIRSSGQVQ*PWPASSLTHWISSSPARQSLSTSQVSPI 742
ASP T+ + T +PS S P+ S+ I + P+ S S S P+
Sbjct: 269 ASPSTSSVATSAPSVPSALSSISSTPFMKPSIPSTIPTIPSAYSASVSSQPPL 321
>SPCC18.11c |sdc1||Dpy-30 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 109
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 536 VQTAFSVPEHSRLT*QASPRTNP 604
VQT+FS P + LT +SP +NP
Sbjct: 81 VQTSFSNPASTPLTQTSSPSSNP 103
>SPBC651.06 |mug166||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 234
Score = 25.8 bits (54), Expect = 6.5
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 601 SASDTESIHGDQILGTGAVTLAGFVLDALDLQLT-GQTVAIHFA 729
S+ + S HGD LG L VLDA Q T QT H A
Sbjct: 20 SSGNESSAHGDASLGQADKPLTVDVLDAWTTQFTKKQTRVFHEA 63
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 249 PRMRRLRRDTHPRSLKLEYIARSRYKP 329
PR R D PRSL+ + RSR P
Sbjct: 76 PRRERRYDDYEPRSLRYSSVGRSRSPP 102
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 25.4 bits (53), Expect = 8.6
Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 6/122 (4%)
Frame = -1
Query: 591 GEACQVSLE-CSGTENAVCTDGVCSCNTGYQQVDDFCAPVIG-GTCSVDSDCVIPNTACF 418
G C+ S C E C + + C +G G+C+ C + C
Sbjct: 371 GTLCRQSTNPCDKPEFCTGISSKCPVDENWDD-GRICQDSLGMGSCA-SGVCTSASRQCK 428
Query: 417 EIDNSMTCQCKERFVAYDDECWPNVDGFQSACNVTAQC----TQALGNEGVCLDGACACV 250
++ N + C + D C + C ++A+ T+ G G+C +G C +
Sbjct: 429 KLTNFSSLSC------HSDSCKVSCQNEDGTCFISAKDYIDGTRCRG--GLCYNGVCVPI 480
Query: 249 EG 244
EG
Sbjct: 481 EG 482
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,188,235
Number of Sequences: 5004
Number of extensions: 69029
Number of successful extensions: 280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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