Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14e22f
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    27   0.17 
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    27   0.17 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    24   1.2  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   2.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   3.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.9  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +2

Query: 419 RGRCWPIAEYGATCTRHEE--CLSVMRDPFSLR-CDGTCVCATGYYSRQRGEC 568
           RG+C P  E  + C    +  C +V+  P  ++ C   CVC  GY   ++  C
Sbjct: 34  RGKC-PSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVC 85


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +2

Query: 419 RGRCWPIAEYGATCTRHEE--CLSVMRDPFSLR-CDGTCVCATGYYSRQRGEC 568
           RG+C P  E  + C    +  C +V+  P  ++ C   CVC  GY   ++  C
Sbjct: 34  RGKC-PSNEIFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLRNKKKVC 85


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 230 SCACPHGHQSVLGGSLCATVAPYHT 304
           SCACP G + +  G +C      H+
Sbjct: 61  SCACPDGLKLLSDGLMCVEKDSIHS 85


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 230 SCACPHGHQSVLGGSLC 280
           SCACP G + +  G +C
Sbjct: 61  SCACPDGLKLLSDGLMC 77


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 346 REQS*ALMTFYAS*SMIRSHGSAQASSQYGLVSVRTGAASA 224
           ++Q+ A   F A+ SM+   GS  ASS     +    AA+A
Sbjct: 103 QQQAVAAAAFGATSSMVPGFGSTAASSAALAAAAAVDAATA 143


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 264 WEEACALPWLR 296
           W++A AL WLR
Sbjct: 224 WDQALALRWLR 234


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 179 SEDDDCSSLAGSVCRSGSCACPHGHQSVLGGSLCATVA 292
           S +  CS    S+      A P GH +     L AT+A
Sbjct: 495 STESTCSGEVASLTEYHHVAPPSGHHASSAPLLAATLA 532


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 264 WEEACALPWLR 296
           W++A AL WLR
Sbjct: 224 WDQALALRWLR 234


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,730
Number of Sequences: 438
Number of extensions: 2604
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)