Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14e19r
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    30   7.9  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 18/72 (25%), Positives = 35/72 (48%)
 Frame = -3

Query: 525 FLLINIKYFVHVPLD*MNCLYFILVVYLSISLYVFHKKNTFCIHYVRYVSKHLSVRSPTH 346
           +L I    F ++ L     +Y  L +YL I LY+F     + +H   Y+   + +    +
Sbjct: 34  YLYIYFYIFTYIYLYIFIYIYICLYIYLYIYLYIFTYIYIY-LHIFIYLHIFIYICICLY 92

Query: 345 LYIYFFHFVSFY 310
           ++IY F +++ Y
Sbjct: 93  IFIYVFIYINIY 104



 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/71 (21%), Positives = 37/71 (52%)
 Frame = -3

Query: 522 LLINIKYFVHVPLD*MNCLYFILVVYLSISLYVFHKKNTFCIHYVRYVSKHLSVRSPTHL 343
           L + I  F+++ +     +Y  + VY+ I LY++    T+   Y+ ++  ++ +    ++
Sbjct: 5   LYVYIYMFMYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYIYLYI-FIYIYICLYIYLYI 63

Query: 342 YIYFFHFVSFY 310
           Y+Y F ++  Y
Sbjct: 64  YLYIFTYIYIY 74


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 525 FLLINIKYFVHVPLD*MNCLYFILVVYLSISLYVFHKKNTF-CIHYVRYVSKHLSVRSPT 349
           ++ +++   VH+ +    C++  + +Y  I   +F     + C++   Y+  H+ V S  
Sbjct: 165 YVCVHMYTCVHMCIHKYTCMHMCIHMYTCIHRCIFIYTYVYICVYIHIYICIHVCVYSYI 224

Query: 348 HLYIYFF 328
           H+Y Y +
Sbjct: 225 HMYTYVY 231


>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 471 CLYFILVVYLSISLYVFHKKNTFCIHYVRYVSKHLSVRSPTHLYIYFF 328
           C +  + VY  I +Y++   +  C+H   YVS ++ + +   +YIY +
Sbjct: 88  CAHIHMCVYTYIYVYIYTHIH-ICVHINMYVSIYVYIYTCIQIYIYMY 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,963,278
Number of Sequences: 237096
Number of extensions: 1812462
Number of successful extensions: 10976
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10972
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)