Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14e06r
         (765 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   188   7e-50
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   185   3e-49
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   185   5e-49
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   126   2e-31
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase protein.
          Length = 580

 Score =  188 bits (457), Expect = 7e-50
 Identities = 94/252 (37%), Positives = 143/252 (56%)
 Frame = -1

Query: 765  NFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINM 586
            NF  I D++  S+A+D K+ +D+++   P     NWV GNHDN R+A+R+G    D I M
Sbjct: 313  NFMFIADLNNQSTASDFKQLIDRWVANVPNGSVTNWVSGNHDNHRVASRFGRQRGDEIVM 372

Query: 585  LVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPE 406
            L L LPG+ V Y G+EIG+ED + ++++TVDP+GCN   P KY   SRDPERTP+ W+  
Sbjct: 373  LTLTLPGIGVVYNGDEIGMEDRWFTYQETVDPAGCNAG-PAKYYLKSRDPERTPYQWDNS 431

Query: 405  KNAGFSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGRYESLAL 226
             +AGFS  +KTWLP+ E Y++LN+  QK    SH   +K+LS L+++     G  E   +
Sbjct: 432  TSAGFSQTNKTWLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDVI 491

Query: 225  NQDIFVFKRWLNDVIYLVVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNEGDTFDA 46
            +  +   KR L +   +V++N       ++LT     +  V  +   V S  + G+    
Sbjct: 492  DGRVLSVKRELGNDTVIVMMNFSKNPVTVNLTKLHPPADLVVYACNVVGSGLSHGNWIYP 551

Query: 45   KSLPVVGFEGLV 10
             S+ + G    V
Sbjct: 552  ASMTIPGSNSAV 563


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  185 bits (451), Expect = 3e-49
 Identities = 91/249 (36%), Positives = 134/249 (53%), Gaps = 1/249 (0%)
 Frame = -1

Query: 765  NFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINM 586
            NF  I +V   S+++D K+ VD ++TY P     NWV GNHD  R+ +R+G      I  
Sbjct: 307  NFAFIKNVSRDSNSSDFKKLVDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITT 366

Query: 585  LVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPE 406
            + LLLPGVAV Y G+EIG+ D Y+SWEDT DP GC       Y   SRDP RTPF W+  
Sbjct: 367  MSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTPFQWDDS 425

Query: 405  KNAGFSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGRYESLAL 226
             +AGFS++  TWL + E Y+T+N+  +K  + S   ++K  + L++   F+     +  L
Sbjct: 426  VSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRML 485

Query: 225  NQDIFVFKRWLNDVIYL-VVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNEGDTFD 49
            N ++F F R   D   L  ++N  + E  +DL  F NV   + +   + NS        +
Sbjct: 486  NDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNE 545

Query: 48   AKSLPVVGF 22
               +  +GF
Sbjct: 546  QVKVSALGF 554


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  185 bits (450), Expect = 5e-49
 Identities = 90/249 (36%), Positives = 134/249 (53%), Gaps = 1/249 (0%)
 Frame = -1

Query: 765  NFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINM 586
            NF  I +V   S+++D K+ +D ++TY P     NWV GNHD  R+ +R+G      I  
Sbjct: 307  NFAFIKNVSRDSNSSDFKKLIDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITT 366

Query: 585  LVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPE 406
            + LLLPGVAV Y G+EIG+ D Y+SWEDT DP GC       Y   SRDP RTPF W+  
Sbjct: 367  MSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTPFQWDDS 425

Query: 405  KNAGFSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGRYESLAL 226
             +AGFS++  TWL + E Y+T+N+  +K  + S   ++K  + L++   F+     +  L
Sbjct: 426  VSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRML 485

Query: 225  NQDIFVFKRWLNDVIYL-VVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNEGDTFD 49
            N ++F F R   D   L  ++N  + E  +DL  F NV   + +   + NS        +
Sbjct: 486  NDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNE 545

Query: 48   AKSLPVVGF 22
               +  +GF
Sbjct: 546  QVKVSALGF 554


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase protein.
          Length = 588

 Score =  126 bits (304), Expect = 2e-31
 Identities = 82/258 (31%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
 Frame = -1

Query: 765  NFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASLVDGINM 586
            NF  ITD ++SS+    K  +D ++   P +   NWV+GNHD  R+ TRY     D + M
Sbjct: 320  NFKFITDANSSSTPEQFKVIIDNWIKGTPQNNVPNWVMGNHDRVRVGTRY-PGRADHMIM 378

Query: 585  LVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTPFHWNPE 406
            L ++LPGVAVTY GEEIG+ D              NT     Y    RD  RTPF W+  
Sbjct: 379  LEMILPGVAVTYYGEEIGMVD--------------NTT---IYKYDVRDGCRTPFQWDNS 421

Query: 405  KNAGFS-----TADKTWLPMAEGYET-LNVEVQKASERSHLKVYKALSDLRQENTFRYGR 244
             NAGFS       +K WLP+   Y++ LN+E +K    SH  +Y  L+ LR+ +  + G 
Sbjct: 422  INAGFSKIAENLLEKNWLPVHTSYKSGLNLEQEKKDSISHYHLYTNLTALRKRDVLKKGN 481

Query: 243  YESLALNQDIFVFKRWLNDVIYLVVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNE 64
            +    LN+ +    R   +    +++N       +D++   N   N  +   SVNS    
Sbjct: 482  FTIEILNKTVLAVVRQSEEEAVSLLINFSKNNTIVDISKLVNKRNNAKIYTSSVNSNLTV 541

Query: 63   GDTFDAKSLPVVGFEGLV 10
              T +  ++ + G   ++
Sbjct: 542  NQTVNPVAINIPGDTSII 559


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 377 LSAVENPAFFSGFQWKGVLSGSLD 448
           +S ++   +F GF W+G+ + +L+
Sbjct: 617 ISEIQKHKWFDGFNWEGLRARTLE 640


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 370 PGLVSGRESSVFLGVPMERSPFG 438
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 370 PGLVSGRESSVFLGVPMERSPFG 438
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,950
Number of Sequences: 438
Number of extensions: 5019
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)