Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14e02r
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   1.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   1.1  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   2.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.9  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 443 SYAYNTAKVCIHRITHKQRCKYC 511
           SYA    K CI     + RC+YC
Sbjct: 143 SYACREEKSCIIDKRQRNRCQYC 165


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 443 SYAYNTAKVCIHRITHKQRCKYC 511
           SYA    K CI     + RC+YC
Sbjct: 143 SYACREEKSCIIDKRQRNRCQYC 165


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 667 TSERVIIFFTLNEIVQWIGLTVFEIWI 587
           T  R  +F+T+N I+  +G+T   + +
Sbjct: 244 TMRRKTLFYTVNLIIPCVGITFLTVLV 270


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 504 NIVHHALFNTPSILRANSTENIVSVIRLIHISNTVSPI 617
           N + H L N+P+I+         +++    ISN + P+
Sbjct: 17  NRITHILANSPAIIILGQDSKAKAIVVNTLISNDILPV 54


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +3

Query: 504 NIVHHALFNTPSILRANSTENIVSVIRLIHISNTVSPI 617
           N + H L N+P+I+         +++    ISN + P+
Sbjct: 55  NRITHILANSPAIIILGQDSKAKAIVVNTLISNDILPV 92


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 19  MNLKC-VLVSGVNIFKVT*VNSSLFVCLSQIMLQSLFTIA*LSVYLKK 159
           M L+C +    VN+  V   NS LFV  +Q     +FTI    +Y K+
Sbjct: 1   MMLRCNIWTLAVNVLFV---NSFLFVIAAQDSSGRIFTICVPEIYSKE 45


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 19  MNLKC-VLVSGVNIFKVT*VNSSLFVCLSQIMLQSLFTIA*LSVYLKK 159
           M L+C +    VN+  V   NS LFV  +Q     +FTI    +Y K+
Sbjct: 1   MMLRCNIWTLAVNVLFV---NSFLFVIAAQDSSGRIFTICVPEIYSKE 45


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 19  MNLKC-VLVSGVNIFKVT*VNSSLFVCLSQIMLQSLFTIA*LSVYLKK 159
           M L+C +    VN+  V   NS LFV  +Q     +FTI    +Y K+
Sbjct: 1   MMLRCNIWTLAVNVLFV---NSFLFVIAAQDSSGRIFTICVPEIYSKE 45


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -1

Query: 137 YAI-VNKLCSII*LRHT 90
           YA+ V K+C I+ LRHT
Sbjct: 209 YAMAVMKMCDILHLRHT 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,980
Number of Sequences: 438
Number of extensions: 4612
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)