Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14e02f
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2931|AAZ52504.1|  167|Drosophila melanogaster CG33931-P...    78   9e-15
AY075522-1|AAL68330.1|  148|Drosophila melanogaster RE70209p pro...    46   6e-05
AE014298-2932|AAN09518.1|  148|Drosophila melanogaster CG33932-P...    46   6e-05
AY119255-1|AAM51115.1|  358|Drosophila melanogaster SD22372p pro...    29   7.3  
AE014298-2813|AAF48931.1|  358|Drosophila melanogaster CG14194-P...    29   7.3  

>AE014298-2931|AAZ52504.1|  167|Drosophila melanogaster CG33931-PA,
           isoform A protein.
          Length = 167

 Score = 78.2 bits (184), Expect = 9e-15
 Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +2

Query: 71  YPNKNYALKKRLPPRPVNGD-NVLFITKKTNFKAQLDKCCDLLTRGEKEIILHGLGAAIQ 247
           +  +N+ + ++ PPRP   D + ++IT KT+FKAQ  +C +L+  G  EI LH +G ++ 
Sbjct: 19  HKQQNHRVVRKQPPRPAVSDRHNIYITSKTDFKAQQRRCEELINSGAHEIFLHCMGFSVT 78

Query: 248 RCCNLALQLEILFSGTCQIEVNTGSVDLVDDLEPLTDELD 367
           R  N+AL+L     G     +NT +V LVD+L PL D  D
Sbjct: 79  RGLNIALRLVQNSDGALSYAINTSTVQLVDELHPLCDAED 118


>AY075522-1|AAL68330.1|  148|Drosophila melanogaster RE70209p
           protein.
          Length = 148

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 14/75 (18%)
 Frame = +3

Query: 468 FTLNEIVQWIGLTVFEIWINLITLTIFSVLLALKI--------DGVLNSA---WWTIFAP 614
           F L+E+V+W+GLT FEI +NL  L +F++ L +K+         G+L      W+T+F+P
Sbjct: 2   FKLSELVRWLGLTEFEILVNLCGLLVFTITLTVKLHLQARAGPGGILPEPMGDWFTVFSP 61

Query: 615 -FVCE*CDE--CILL 650
            F  + C+   C+++
Sbjct: 62  LFFIDICNAYFCVIV 76


>AE014298-2932|AAN09518.1|  148|Drosophila melanogaster CG33932-PA,
           isoform A protein.
          Length = 148

 Score = 45.6 bits (103), Expect = 6e-05
 Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 14/75 (18%)
 Frame = +3

Query: 468 FTLNEIVQWIGLTVFEIWINLITLTIFSVLLALKI--------DGVLNSA---WWTIFAP 614
           F L+E+V+W+GLT FEI +NL  L +F++ L +K+         G+L      W+T+F+P
Sbjct: 2   FKLSELVRWLGLTEFEILVNLCGLLVFTITLTVKLHLQARAGPGGILPEPMGDWFTVFSP 61

Query: 615 -FVCE*CDE--CILL 650
            F  + C+   C+++
Sbjct: 62  LFFIDICNAYFCVIV 76


>AY119255-1|AAM51115.1|  358|Drosophila melanogaster SD22372p
           protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 534 TLTIFSVLLALKIDGVLNSAWWTIFAP 614
           +L IF  L AL++D  ++  +W IF P
Sbjct: 20  SLFIFVTLFALRLDNYIDWPYWAIFTP 46


>AE014298-2813|AAF48931.1|  358|Drosophila melanogaster CG14194-PA
           protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 534 TLTIFSVLLALKIDGVLNSAWWTIFAP 614
           +L IF  L AL++D  ++  +W IF P
Sbjct: 20  SLFIFVTLFALRLDNYIDWPYWAIFTP 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,798,389
Number of Sequences: 53049
Number of extensions: 525494
Number of successful extensions: 1551
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)