BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14d19f
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110493-1|AAI10494.1| 680|Homo sapiens KIAA1161 protein protein. 44 5e-04
BC070098-1|AAH70098.1| 714|Homo sapiens KIAA1161 protein. 44 5e-04
AL356494-2|CAI15965.1| 680|Homo sapiens KIAA1161 protein. 44 5e-04
AB032987-1|BAA86475.2| 680|Homo sapiens KIAA1161 protein protein. 44 5e-04
Y12815-1|CAA73346.1| 384|Homo sapiens chemokine receptor D6 pro... 32 1.7
U94888-1|AAB97728.1| 384|Homo sapiens CC-chemokine-binding rece... 32 1.7
BT006800-1|AAP35446.1| 384|Homo sapiens chemokine binding prote... 32 1.7
BC112045-1|AAI12046.1| 384|Homo sapiens chemokine binding prote... 32 1.7
BC101629-1|AAI01630.1| 384|Homo sapiens chemokine binding prote... 32 1.7
BC020558-1|AAH20558.1| 384|Homo sapiens CCBP2 protein protein. 32 1.7
BC011631-1|AAH11631.1| 384|Homo sapiens chemokine binding prote... 32 1.7
BC008816-1|AAH08816.1| 384|Homo sapiens chemokine binding prote... 32 1.7
AY262687-1|AAP20651.1| 384|Homo sapiens chemokine-binding prote... 32 1.7
AF481959-1|AAP42156.1| 384|Homo sapiens chemokine receptor D6 p... 32 1.7
U50196-1|AAA97893.1| 345|Homo sapiens adenosine kinase protein. 30 6.8
>BC110493-1|AAI10494.1| 680|Homo sapiens KIAA1161 protein protein.
Length = 680
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Frame = +1
Query: 268 IHWDGPAD-RVFEDCFNFG--SLQWYGGPEQKQQYWPIQNSNLQK------YSIISKEED 420
+ W+ A R E G + WYGG E + Q+WPI+ Q+ + S +
Sbjct: 127 VRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDAA 186
Query: 421 NSAVSERYWLNSAGQYFYVQPEAPLFIDYHNVE 519
+ ERYWL+S V P + +++ E
Sbjct: 187 FGGILERYWLSSRAAAIKVNDSVPFHLGWNSTE 219
>BC070098-1|AAH70098.1| 714|Homo sapiens KIAA1161 protein.
Length = 714
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Frame = +1
Query: 268 IHWDGPAD-RVFEDCFNFG--SLQWYGGPEQKQQYWPIQNSNLQK------YSIISKEED 420
+ W+ A R E G + WYGG E + Q+WPI+ Q+ + S +
Sbjct: 161 VRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDAA 220
Query: 421 NSAVSERYWLNSAGQYFYVQPEAPLFIDYHNVE 519
+ ERYWL+S V P + +++ E
Sbjct: 221 FGGILERYWLSSRAAAIKVNDSVPFHLGWNSTE 253
>AL356494-2|CAI15965.1| 680|Homo sapiens KIAA1161 protein.
Length = 680
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Frame = +1
Query: 268 IHWDGPAD-RVFEDCFNFG--SLQWYGGPEQKQQYWPIQNSNLQK------YSIISKEED 420
+ W+ A R E G + WYGG E + Q+WPI+ Q+ + S +
Sbjct: 127 VRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDAA 186
Query: 421 NSAVSERYWLNSAGQYFYVQPEAPLFIDYHNVE 519
+ ERYWL+S V P + +++ E
Sbjct: 187 FGGILERYWLSSRAAAIKVNDSVPFHLGWNSTE 219
>AB032987-1|BAA86475.2| 680|Homo sapiens KIAA1161 protein protein.
Length = 680
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Frame = +1
Query: 268 IHWDGPAD-RVFEDCFNFG--SLQWYGGPEQKQQYWPIQNSNLQK------YSIISKEED 420
+ W+ A R E G + WYGG E + Q+WPI+ Q+ + S +
Sbjct: 127 VRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDAA 186
Query: 421 NSAVSERYWLNSAGQYFYVQPEAPLFIDYHNVE 519
+ ERYWL+S V P + +++ E
Sbjct: 187 FGGILERYWLSSRAAAIKVNDSVPFHLGWNSTE 219
>Y12815-1|CAA73346.1| 384|Homo sapiens chemokine receptor D6
protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>U94888-1|AAB97728.1| 384|Homo sapiens CC-chemokine-binding
receptor JAB61 protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>BT006800-1|AAP35446.1| 384|Homo sapiens chemokine binding protein
2 protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>BC112045-1|AAI12046.1| 384|Homo sapiens chemokine binding protein
2 protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>BC101629-1|AAI01630.1| 384|Homo sapiens chemokine binding protein
2 protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>BC020558-1|AAH20558.1| 384|Homo sapiens CCBP2 protein protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>BC011631-1|AAH11631.1| 384|Homo sapiens chemokine binding protein
2 protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>BC008816-1|AAH08816.1| 384|Homo sapiens chemokine binding protein
2 protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>AY262687-1|AAP20651.1| 384|Homo sapiens chemokine-binding protein
2 protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>AF481959-1|AAP42156.1| 384|Homo sapiens chemokine receptor D6
protein.
Length = 384
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 390 LQVAVLNRPVLLLLFRTTVPLKGTKV--EAVFKNSVRRSIP-MYANAVATGLFIVGCVDI 220
+++ +LN + LLF T+P G V VF + + + + +Y +G+F + C+ +
Sbjct: 81 VEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSL 140
Query: 219 EDYLLIIRS 193
+ YL I+ +
Sbjct: 141 DKYLEIVHA 149
>U50196-1|AAA97893.1| 345|Homo sapiens adenosine kinase protein.
Length = 345
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 457 AGQYFYVQPEAPLFIDYHNVEDNHICFIAEVAAPYSSKRTHNSL 588
AG + +V PE+ L + +H E+N I F ++AP+ S+ SL
Sbjct: 168 AGFFLHVSPESVLKVAHHASENNRI-FTLNLSAPFISQFYKESL 210
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,111,969
Number of Sequences: 237096
Number of extensions: 2216915
Number of successful extensions: 4566
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4552
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -