Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14d13f
(600 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 85 7e-18
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 79 6e-16
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 77 2e-15
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 77 3e-15
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 73 2e-14
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 73 3e-14
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 72 6e-14
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 71 1e-13
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 67 2e-12
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 66 3e-12
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 65 6e-12
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 62 6e-11
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 62 8e-11
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 54 1e-08
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 54 2e-08
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 54 2e-08
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 51 1e-07
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 50 3e-07
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 49 5e-07
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 49 6e-07
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 43 3e-05
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 43 4e-05
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 30 0.30
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 29 0.52
SPBC582.07c |rpn7||19S proteasome regulatory subunit Rpn7|Schizo... 27 1.6
SPAC167.06c |mug143|SPAC57A7.02c|sequence orphan|Schizosaccharom... 27 2.1
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 4.8
SPAC4F10.12 |fta1|sma1|Sim4 and Mal2 associated |Schizosaccharom... 25 6.4
SPAC1002.20 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.5
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 25 8.5
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 25 8.5
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 85.0 bits (201), Expect = 7e-18
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +1
Query: 181 LYEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRNI 360
LYE+L V TA+ ++KK+YRKLALKYHPDKN P A +KFKE++RA+ IL+D KR
Sbjct: 7 LYEVLNVDVTASQAELKKAYRKLALKYHPDKN---PNAGDKFKEISRAYEILADEEKRAT 63
Query: 361 YDNYGSLGL 387
YD +G GL
Sbjct: 64 YDRFGEEGL 72
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 78.6 bits (185), Expect = 6e-16
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 187 EILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRNIYD 366
+IL V K A+ +++K+YR+L ++HPDKN + EA EKF E+N+AH +LSD +R IYD
Sbjct: 10 QILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYD 69
Query: 367 NYGSLGL 387
YG GL
Sbjct: 70 AYGEEGL 76
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 77.0 bits (181), Expect = 2e-15
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = +1
Query: 169 AGDSLYEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDAT 348
A LY+ L+V A+ ++KK+YRKLALKYHPDKN P +KFKE++ A+ +LSD
Sbjct: 3 ADTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKN---PNGEKKFKEISLAYEVLSDPQ 59
Query: 349 KRNIYDNYG 375
+R +YD YG
Sbjct: 60 RRKLYDQYG 68
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 76.6 bits (180), Expect = 3e-15
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPE-ASEKFKEVNRAHTILSDATKRNI 360
Y++L + ATA D+KK+YRKLA+KYHPDKN + P+ ASEKF++++ A+ +L D R+
Sbjct: 10 YDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQ 69
Query: 361 YDNYG 375
YD +G
Sbjct: 70 YDQFG 74
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 73.3 bits (172), Expect = 2e-14
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRNIY 363
Y+IL V K AT ++KK+YRKLAL YHPDKN + EA +FKEV A+TILSD R +
Sbjct: 351 YKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRF 410
Query: 364 DN 369
D+
Sbjct: 411 DS 412
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 72.9 bits (171), Expect = 3e-14
Identities = 35/64 (54%), Positives = 44/64 (68%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRNIY 363
YEIL + KT T ++KKSY+KLAL+ HPDKNH +P A E FK V++A +LSD R Y
Sbjct: 115 YEILDLKKTCTDTEIKKSYKKLALQLHPDKNH-APSADEAFKMVSKAFQVLSDPNLRAHY 173
Query: 364 DNYG 375
D G
Sbjct: 174 DRTG 177
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 72.1 bits (169), Expect = 6e-14
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = +1
Query: 181 LYEILQVPKTATAEDVKKSYRKLALKYHPDKN--HNSPEASEKFKEVNRAHTILSDATKR 354
LY+IL+V A+AE++KKSY++LAL +HPDK H EA+E+F+ V A+ IL D R
Sbjct: 7 LYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESR 66
Query: 355 NIYDNYG 375
+YD YG
Sbjct: 67 EMYDMYG 73
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 71.3 bits (167), Expect = 1e-13
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEAS-EKFKEVNRAHTILSDATKRNI 360
Y+IL + A + +KKSYR+LA+ YHPDKN +PEA+ EKF+++ A+ +LSD R
Sbjct: 11 YDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREK 70
Query: 361 YDNYGSLG 384
YD G +G
Sbjct: 71 YDKLGKVG 78
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 66.9 bits (156), Expect = 2e-12
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPE-ASEKFKEVNRAHTILSDATKRNI 360
Y IL++ K AT + ++K Y LAL+YHPD+N E A ++F+ + AH +LSDATKR I
Sbjct: 14 YAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLI 73
Query: 361 YDNYGSLGLYIAEQF 405
YD L Q+
Sbjct: 74 YDQLFGLSTRTRSQY 88
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 66.5 bits (155), Expect = 3e-12
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = +1
Query: 181 LYEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEAS--EKFKEVNRAHTILSDATKR 354
LY L +PK AT++ +K+SY +L+ +HPD++ +A+ EKF+ + A+ +LSD +K+
Sbjct: 9 LYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKK 68
Query: 355 NIYDNYGSLGL 387
IYDN+G GL
Sbjct: 69 EIYDNFGEQGL 79
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 65.3 bits (152), Expect = 6e-12
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = +1
Query: 160 LSTAGDSL--YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTI 333
+++ GDS+ YE+L + + A +++ +++RK +LKYHPDKN N P+A+EKF + A+
Sbjct: 1 MASEGDSIDYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNA 60
Query: 334 LSDATKRNIYDN 369
L D R YD+
Sbjct: 61 LIDVQLRKAYDS 72
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 62.1 bits (144), Expect = 6e-11
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRNIY 363
Y+ L V K+A+A ++K +Y KLA +YHPD N + A +KF E+ +A+ +L D K+ +
Sbjct: 88 YKTLGVSKSASASEIKSAYYKLAKQYHPDANPDK-AAQDKFVEIKQAYEVLQDPKKKKAF 146
Query: 364 DNYGS 378
D YG+
Sbjct: 147 DTYGA 151
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 61.7 bits (143), Expect = 8e-11
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRNIY 363
YEILQV + +++K +YRKLAL+YHPD+N + +E F ++N A+ ILS+ KR +
Sbjct: 11 YEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWH 70
Query: 364 D 366
+
Sbjct: 71 E 71
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 54.4 bits (125), Expect = 1e-08
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSP---EASEKFKEVNRAHTILSDATKR 354
Y +L V K A+ E ++++YRK AL++HPD+ H+ EA +F +V A+ +LSD +R
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 355 NIYDNYGSL 381
YD G L
Sbjct: 93 KHYDKTGQL 101
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNS--PEASEKFKEVNRAHTILSDATKRN 357
Y IL + A+AE++K +Y+K AL+ HPD+ S A+E+F+ VN A+ +LSD ++R
Sbjct: 6 YAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRA 65
Query: 358 IYD 366
YD
Sbjct: 66 QYD 68
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 54.0 bits (124), Expect = 2e-08
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 13/77 (16%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKNHNS---------PEAS----EKFKEVNRA 324
YEIL++P+T TA D+K+ Y +L K+HPDK N+ PE + E F+ + A
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAA 93
Query: 325 HTILSDATKRNIYDNYG 375
+ +LSD +R YD +G
Sbjct: 94 NALLSDKRRREEYDRFG 110
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 50.8 bits (116), Expect = 1e-07
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDK-----NHNSPEASEKFKEVNRAHTILSDAT 348
YEIL + K + +DV++ Y++L++K+HPDK N E + + E+ A+ L+D
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159
Query: 349 KRNIYDNYGS 378
R Y YG+
Sbjct: 160 TRENYALYGT 169
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 50.0 bits (114), Expect = 3e-07
Identities = 24/82 (29%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 130 NRAAKMDKRKLSTAGDSLYEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFK 309
NR ++D R LS+ + Y++L + + +D++ YRK +L HPDKN ++P+A++ F
Sbjct: 16 NRGREID-RILSSFKLNAYDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFD 74
Query: 310 EVNRAHT-ILSDATKRNIYDNY 372
+ +A + +++D + ++ Y
Sbjct: 75 ILKKAESDLVNDKIRESLDSAY 96
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 49.2 bits (112), Expect = 5e-07
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 184 YEILQVPKTATAEDVKKSYRKLALKYHPDKN-HNSPEASEKFKEVNRAHTILSDATKRNI 360
Y IL T++ ++++ Y KL L+YHPD+N E +F+ + +AH +L D R +
Sbjct: 14 YTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLREL 73
Query: 361 YD 366
+D
Sbjct: 74 FD 75
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 48.8 bits (111), Expect = 6e-07
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +1
Query: 178 SLYEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRN 357
+ YE+L+VP A+ +++ ++YRK ++ YHPDKN P++ E + + IL + R
Sbjct: 40 TFYELLEVPTKASIKEINRAYRKKSILYHPDKN---PKSKELYTLLGLIVNILRNTETRK 96
Query: 358 IYDNY 372
YD +
Sbjct: 97 RYDYF 101
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 184 YEILQVP--KTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKRN 357
Y +L + KT T +++K++YRK L +HPDK P +V A+ +LS R
Sbjct: 4 YSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQ 63
Query: 358 IY 363
Y
Sbjct: 64 QY 65
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 42.7 bits (96), Expect = 4e-05
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 211 ATAEDVKKSYRKLALKYHPDKNHNSPEASEK--FKEVNRAHTILSDATKRNIYDN 369
A E +KK++ K LK+HPDK S ++ FK + +A+ ILSD +R +D+
Sbjct: 111 ADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPVRRRQFDS 165
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 29.9 bits (64), Expect = 0.30
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 103 CSLLLWKVE--NRAAKMDKRKLSTAGDSLYEILQVPKTATAE--DVKKSYRKLALKYHPD 270
CS L K+ N+ AK K+S+ L + T + E VK L + D
Sbjct: 864 CSNLQEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDD 923
Query: 271 KNHNSPEASEKFKEVNRA 324
+N +EKFKEV++A
Sbjct: 924 QNKEKSVNNEKFKEVSQA 941
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 29.1 bits (62), Expect = 0.52
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 130 NRAAKMDKRKLSTAGDSLYEILQVPKTATAEDVKKSYRK 246
NR K+ KRKL G +L + PK A+ KKS +K
Sbjct: 228 NRKLKLKKRKLKELGITLESDVSHPKAASPVASKKSSKK 266
>SPBC582.07c |rpn7||19S proteasome regulatory subunit
Rpn7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 409
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 181 LYEIL-QVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTIL-SDATKR 354
LY+ L + PKT+ + D ++ +K + +K +A E +E+N H IL + K
Sbjct: 60 LYKYLSENPKTSASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQELNGEHEILEAMKNKA 119
Query: 355 NIYDN 369
+ Y N
Sbjct: 120 DYYTN 124
>SPAC167.06c |mug143|SPAC57A7.02c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 121
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 175 DSLYEILQVPKTATAEDVKKSYRKLALKYHPDKNHNSPEASEKFKEVNRAHTILSDATKR 354
D L +L K TA++ S ++ L +HP+ N+P A ++ + A + DA K+
Sbjct: 62 DKLNSLLGNIKVRTAQEDGVSVEEV-LMHHPELLRNAPHALQQSVKEILASKEVGDAFKK 120
Query: 355 N 357
N
Sbjct: 121 N 121
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -1
Query: 309 LKFFRSFRAVVIFIRMIFQS*FSITFLYIFCRSSFRNLEYFIKTISS 169
++F + F ++ F ++I+Q +FL+ S R +Y+I +SS
Sbjct: 126 IRFIKLFDSLKEFHKLIYQLISEKSFLWDLYASFMRYWKYYITNVSS 172
>SPAC4F10.12 |fta1|sma1|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -1
Query: 465 T*YFAPGTRYHEICIDVFFSKLFCNIKSERTVIVVNISFCSVTQYSVGTIDFLKFFRSFR 286
T YF TR+ ++ I+ F N S + ++IS+ + + V + FF SFR
Sbjct: 47 TGYFTNSTRFADLIIEKATFTEFGNTSSFPKFLKLDISYETSSDLEVKRKGQMFFFESFR 106
>SPAC1002.20 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 131 FSTFHNSNEHNLKFKT*NRIYFQ 63
+ ++H++ HNL F T + IYF+
Sbjct: 20 YPSYHDTVVHNLAFSTSDYIYFK 42
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 319 RAHTILSDATKRNIYDNYGSLGLYIAEQFGEENVNAYFV 435
R + ILSD T + NY S G I FG NA ++
Sbjct: 207 RLNAILSDTTGTLVASNYASPGTEIGVIFG-TGCNACYI 244
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/17 (47%), Positives = 14/17 (82%), Gaps = 1/17 (5%)
Frame = +2
Query: 140 PR-WIKGSCQLLEIVFM 187
PR W+ G C+L+E+++M
Sbjct: 1259 PRLWLNGKCELIEMIWM 1275
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,365,472
Number of Sequences: 5004
Number of extensions: 45533
Number of successful extensions: 152
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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