Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14d11r
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 2.4
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 7.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 7.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 7.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 7.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 7.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 7.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 7.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.6
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 360 WFIHDDAMGSYHYPT 404
W I D A +HYPT
Sbjct: 786 WMIIDPAKAMHHYPT 800
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 482 YIKKQIGQNIKLFTKQYLMI 541
Y+ G ++KL+TKQ L +
Sbjct: 341 YVVDSYGNHVKLYTKQGLNV 360
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 482 YIKKQIGQNIKLFTKQYLMI 541
Y+ G ++KL+TKQ L +
Sbjct: 341 YVVDSYGNHVKLYTKQGLNV 360
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 152 WDTVTYPGISDLYSLCSH 99
WD Y G+++LY H
Sbjct: 84 WDPAEYGGVTELYVPSEH 101
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 160 PRFIPPNAYKFRPP 173
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 160 PRFIPPNAYKFRPP 173
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 160 PRFIPPNAYKFRPP 173
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 160 PRFIPPNAYKFRPP 173
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 160 PRFIPPNAYKFRPP 173
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 160 PRFIPPNAYKFRPP 173
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 163 PRFIPPNAYKFRPP 176
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 622 PKLTKPNQFKSRPP 663
P+ PN +K RPP
Sbjct: 160 PQFIPPNAYKFRPP 173
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 371 MYKPLTY*CEVSTYKANINW 312
+Y PL +V+T K N+ W
Sbjct: 1001 VYAPLKISLDVNTPKGNMQW 1020
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,840
Number of Sequences: 438
Number of extensions: 4465
Number of successful extensions: 82
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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