Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14d11f
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical...    29   1.9  
U42832-6|AAP40542.2|  342|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U42832-5|ABA03119.1|  468|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p...    28   5.9  
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical...    28   5.9  

>AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical
           protein Y47D7A.16 protein.
          Length = 417

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 269 ISSIITLISGFINYFIASDTSVRRYPKERSFDMLKITLINYFFNIIQNEAYKI 427
           I S+++LI G  NY+   + +   YP   S  M    LIN+FF      A+ +
Sbjct: 153 IPSLLSLIQGTSNYWCDDNKTPHYYPPRFSVSM--FFLINFFFTCAAVAAFLV 203


>U42832-6|AAP40542.2|  342|Caenorhabditis elegans Hypothetical
           protein F01E11.5b protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 496 NDVFRANFCSLPQYLTELDLAAFDFIGLILYYIKEIIYQCYLKH 365
           N V +  F  LP Y       +F    L+++++   IYQ + KH
Sbjct: 46  NTVRQCTFLDLPSYTVYSATGSFFIPTLLMFFVYFKIYQAFAKH 89


>U42832-5|ABA03119.1|  468|Caenorhabditis elegans Hypothetical
           protein F01E11.5c protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 496 NDVFRANFCSLPQYLTELDLAAFDFIGLILYYIKEIIYQCYLKH 365
           N V +  F  LP Y       +F    L+++++   IYQ + KH
Sbjct: 172 NTVRQCTFLDLPSYTVYSATGSFFIPTLLMFFVYFKIYQAFAKH 215


>U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical
           protein F01E11.5a protein.
          Length = 462

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -1

Query: 496 NDVFRANFCSLPQYLTELDLAAFDFIGLILYYIKEIIYQCYLKH 365
           N V +  F  LP Y       +F    L+++++   IYQ + KH
Sbjct: 172 NTVRQCTFLDLPSYTVYSATGSFFIPTLLMFFVYFKIYQAFAKH 215


>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 245 RNVHCIFNISSIITLISGFINYFIASDTSVRRYPKERSFDML 370
           R+ HC F + S     S F+N  I  D SVR    ++S D+L
Sbjct: 342 RDKHCQFGMDSNDPTWSAFLNASIDQDDSVRHEFVQQSKDIL 383


>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
           protein H38K22.1 protein.
          Length = 1570

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 245 RNVHCIFNISSIITLISGFINYFIASDTSVRRYPKERSFDML 370
           R+ HC F + S     S F+N  I  D SVR    ++S D+L
Sbjct: 342 RDKHCQFGMDSNDPTWSAFLNASIDQDDSVRHEFVQQSKDIL 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,058,807
Number of Sequences: 27780
Number of extensions: 258775
Number of successful extensions: 496
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)