Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14d09f
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 322 2e-89
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 2e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 2e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 4e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 4e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 8e-20
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 44 2e-05
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 3e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 2e-04
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 2.6
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 27 3.4
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.5
SPCC1235.10c |sec6||exocyst complex subunit Sec6|Schizosaccharom... 26 5.9
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 26 5.9
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 25 7.9
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 25 7.9
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 25 7.9
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 322 bits (792), Expect = 2e-89
Identities = 157/163 (96%), Positives = 163/163 (100%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 274 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 453
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 454 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 582
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Score = 322 bits (792), Expect = 2e-89
Identities = 157/163 (96%), Positives = 163/163 (100%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 274 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 453
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 196
Query: 454 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 582
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Score = 322 bits (792), Expect = 2e-89
Identities = 157/163 (96%), Positives = 163/163 (100%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 274 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 453
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 272
Query: 454 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 582
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Score = 301 bits (740), Expect = 4e-83
Identities = 146/153 (95%), Positives = 153/153 (100%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 274 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 453
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 348
Query: 454 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 552
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 12 TITLEVESSDTIDNVKSKIQDKE 34
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 88 TITLEVESSDTIDNVKSKIQDKE 110
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 164 TITLEVESSDTIDNVKSKIQDKE 186
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 240 TITLEVESSDTIDNVKSKIQDKE 262
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 316 TITLEVESSDTIDNVKSKIQDKE 338
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 274 IQKESTLHLVLRLRGG-MQIFVKTLTGK 354
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +1
Query: 322 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 501
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 502 IQKESTLHLVLRLRGG-MQIFVKTLTGK 582
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 12 TITLEVESSDTIDNVKSKIQDKE 34
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 274 IQKESTLHLVLRLRGG-MQIFVKTLTGK 354
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 2e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +1
Query: 322 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 501
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 502 IQKESTLHLVLRLRGG-MQIFVKTLTGK 582
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 12 TITLEVESSDTIDNVKSKIQDKE 34
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 274 IQKESTLHLVLRLRGG 321
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 322 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 501
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 502 IQKESTLHLVLRLRGG 549
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 12 TITLEVESSDTIDNVKSKIQDKE 34
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 550 MQIFVKTLTGK 582
MQIFVKTLTGK
Sbjct: 1 MQIFVKTLTGK 11
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 274 IQKESTLHLVLRLRGG 321
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 4e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 322 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 501
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 502 IQKESTLHLVLRLRGG 549
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 582 TITLXVEASDTIEXVKQRSGQEE 650
TITL VE+SDTI+ VK + +E
Sbjct: 12 TITLEVESSDTIDNVKSKIQDKE 34
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 550 MQIFVKTLTGK 582
MQIFVKTLTGK
Sbjct: 1 MQIFVKTLTGK 11
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 8e-20
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 94 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 273
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 274 IQKESTLHLVLRLRGG 321
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 8e-20
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 322 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 501
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 502 IQKESTLHLVLRLRGG 549
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +1
Query: 88 TTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 267
T + + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L
Sbjct: 2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
Query: 268 YNIQKESTLHLVLRL 312
Y IQ ++HLV L
Sbjct: 62 YKIQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 322 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 501
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 502 IQKESTLHLVLRL 540
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +1
Query: 124 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 285
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +1
Query: 352 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 513
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 121 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 294
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 349 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 522
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 2.6
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +1
Query: 97 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 270
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 271 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 360
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 325 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 498
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 499 NIQKESTLHLVL 534
+ T HLV+
Sbjct: 65 DATDLVTFHLVI 76
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 52 DNFNNFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 192
+N N F ETT + L + + +++E + EN+K+ ++ K
Sbjct: 222 NNLNQIVRFIFETTADMIGIDLAKRQVPIQLERTSASENLKSNLKIK 268
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.5
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = -2
Query: 437 SGGIPSLS*ILAFTFSMVSDASTSSVMVLPVSVFTK-----ICIPPLRRNTKWRVDSF*I 273
S IPS + + ++ S A++S VSV T + +PP +T SF
Sbjct: 146 STSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTS----SFST 201
Query: 272 L*SDNVRPSSSCFPAKISRC*SGGMPSLS*IFAFTFSMVSDASTSNVMVLPVRVFTKICM 93
+ + ++ PSSS F + G P + S++S AS S+ VLP + T
Sbjct: 202 ITNTSMIPSSSSFTT------TTGSPYYNTSSFLPSSVISSASLSSSSVLPTSIITSTST 255
Query: 92 VVSFWNS 72
V+ +S
Sbjct: 256 PVTVSSS 262
>SPCC1235.10c |sec6||exocyst complex subunit
Sec6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 730
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 43 TICDNFN----NFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 210
T+ DNF+ NFC + +KT+ I VEA ++ + V I+D + PD
Sbjct: 164 TLSDNFDRLVLNFCRNIFQLVKSGHIKTIV--QIFKIVEAEESSDEVLKSIRDAKSSLPD 221
Query: 211 QQ 216
Q
Sbjct: 222 SQ 223
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 408 LGFHILNGVRCFNF*CDGFTGKCFHKDLHSTS 313
L +G + +N CD F GKCFHK +TS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 22 PSCTT-CPTICDNFNNFCEFQ---KETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 189
PSC+ ++ D+ N +Q +T + +VK + GKT L VE + +E KA + +
Sbjct: 202 PSCSRDVKSLLDHLYNSYFYQLLMTKTPVVFYVKQMVGKTRQLAVEVHNHVEE-KALVDE 260
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 80 WNSQKLLKLSQIVGHVVQLGSSFTN 6
WN +L LS ++G V+ +G+ TN
Sbjct: 748 WNLPRLWGLSTVIGIVLAIGTWITN 772
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.4 bits (53), Expect = 7.9
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 52 DNFNNFCEFQKETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP---PDQQRL 222
++ NN+ + ++ ++K G T EV T+ + + +G P P +
Sbjct: 76 NSHNNYASIVGDASIGHYLK---GPERTSEVSLPQTVNLSEISNNNDKGQPTNTPPVRST 132
Query: 223 IFAGKQLEDGRTLSDYNIQKESTLH 297
I A +G TL+ YN LH
Sbjct: 133 IVAPSLYSEGSTLNHYNNGSHQVLH 157
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,719,849
Number of Sequences: 5004
Number of extensions: 54579
Number of successful extensions: 210
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -