Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14c13r
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   2.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.4  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   4.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   5.4  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   5.4  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   5.4  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   5.4  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = -3

Query: 673 FNIRRRIFSHTVHA*LQTGLLI--HWI 599
           FN+RRR+  H  H  + + L++   WI
Sbjct: 207 FNLRRRLGYHLFHTYIPSALIVVMSWI 233


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 454 HHLVRVVNEEHAEEYRADDGQSHFE 528
           H  V VVN++   E+  DD + H E
Sbjct: 402 HIKVFVVNKDILHEHNVDDNEDHDE 426


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 433 IHLGNHQSVLGHS 395
           +H  NH ++LGHS
Sbjct: 281 VHHANHHAILGHS 293


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 206 YIFFWILLYTIIFMH 250
           Y FF+IL+ T+IF++
Sbjct: 5   YHFFFILVITLIFLY 19


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 520 HFEGGALHHQLKKTPQNENCQTS 588
           H+  G  H QL  TP++ + + S
Sbjct: 371 HYSNGQTHSQLCPTPRSTHLKVS 393


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +2

Query: 428 MYSSGDRTLIIWC 466
           +Y + D+T ++WC
Sbjct: 209 IYHNDDKTFLVWC 221


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 418 HQSVLGHSEPIPVHTQNFE*VKQELMHLVVLLGKRGVI 305
           HQ + G      ++++NF   K+ LM    + GK+  I
Sbjct: 34  HQEMQGKQNSASLNSENFGIFKRALMGFQGVRGKKNSI 71


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 418 HQSVLGHSEPIPVHTQNFE*VKQELMHLVVLLGKRGVI 305
           HQ + G      ++++NF   K+ LM    + GK+  I
Sbjct: 34  HQEMQGKQNSASLNSENFGIFKRALMGFQGVRGKKNSI 71


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 418 HQSVLGHSEPIPVHTQNFE*VKQELMHLVVLLGKRGVI 305
           HQ + G      ++++NF   K+ LM    + GK+  I
Sbjct: 34  HQEMQGKQNSASLNSENFGIFKRALMGFQGVRGKKNSI 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,299
Number of Sequences: 438
Number of extensions: 4515
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)