Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14c09f
(584 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 2.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 6.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 6.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 6.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 6.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 6.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.9
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 8.9
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 279 NGFPSSSLYAPTPRFTFLGCVSFLYASVM 193
N P S Y FLGC FL+A+++
Sbjct: 283 NSLPKVS-YIKASEIWFLGCTIFLFAAMV 310
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 166 DGSARCNLRHYRSIQEG 216
DG AR N+ H++ I+ G
Sbjct: 535 DGPARYNIIHFKQIEPG 551
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 8.9
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -2
Query: 550 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 407
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPGSRDRS 91
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 204 ASVMPKITSGGPI 166
ASV P++ SG P+
Sbjct: 578 ASVQPQVISGNPV 590
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,199
Number of Sequences: 438
Number of extensions: 3357
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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