Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14b23r
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   135   4e-34
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    77   1e-16
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    38   8e-05

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  135 bits (326), Expect = 4e-34
 Identities = 71/164 (43%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
 Frame = -1

Query: 555 IVAQMFVFXAAGFETSSSATSYTLHQLAFHQEIQKEIQCEIDEVLSRHDNKLCYDAILEM 376
           I AQ FVF  AGFETSS+  S  L++LA +Q++QK+++ EI+    +++ +L YD I EM
Sbjct: 294 IAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEM 353

Query: 375 PLLTMAFKEALRMFPSLGNLHRVCTRSYTIPELGITIDPGVRIIIPAQAIQNDAKYFDDP 196
             L   FKE LRM+P    L R     YT  +  ITI   ++I IPA AI  D+  + +P
Sbjct: 354 EYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAIYPNP 413

Query: 195 SEFRPKRFAKDSEIKK--FSFLPFGAGPRNCIGARLGEMQSLAG 70
             F P+RF +D+   +    +LPFG GPRNCIGAR    Q+  G
Sbjct: 414 DSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVG 457


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 77.4 bits (182), Expect = 1e-16
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
 Frame = -1

Query: 522 GFETSSSATSYTLHQLAFHQEIQKEIQCEIDEVLSRHDNKLCYDAILEMPLLTMAFKEAL 343
           G +T++S +S+ L  +  H +IQ+++  E+DE+    D    +   LEM  L     E L
Sbjct: 349 GHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGDSDRPATFQDTLEMKYLERCLLETL 408

Query: 342 RMFPSLGNLHRVCTRSYTIPELGITIDPGVRIIIPAQAIQNDAKYFDDPSEFRPKRFAKD 163
           RM+P +  + R       +     TI  G  ++I    +      + +P  F P  F  +
Sbjct: 409 RMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDNFLPE 468

Query: 162 SEIKK--FSFLPFGAGPRNCIGAR 97
               +  ++F+PF AGPR+C+G +
Sbjct: 469 KTANRHYYAFVPFSAGPRSCVGRK 492


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 37.9 bits (84), Expect = 8e-05
 Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
 Frame = -1

Query: 579 QPEMDTKCIVAQMFVFXAAGFETSSSATSYTLHQLAFHQEIQKEIQCEIDEVLSRHDNKL 400
           Q  +D +   A +  F AAG  T  +   +    +  +  +Q ++  E    L+     L
Sbjct: 312 QKNLDIRDKKAAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLY-EETYALAPAGCDL 370

Query: 399 CYDAILEMPLLTMAFKEALRMFPSLGNLHRVCTRSYTIPELGITIDPGVRIIIPAQAIQN 220
             D + +   L     E+LR+ P+   + R+      +   G  +  G  +++       
Sbjct: 371 TIDNLRKAKYLRACITESLRLIPTTTCIARILDEPIELS--GYRLTAGTVVLLHTWIAGL 428

Query: 219 DAKYFDDPSEFRPKRFAKDSEIKK-FSFLPFGAGPRNCIGARLGEM 85
           + + F D  ++ P+R+   +         PFGAG R C G R  ++
Sbjct: 429 NEENFKDAKKYLPERWTTPTTPHSPLLVAPFGAGRRICPGKRFVDL 474


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,808
Number of Sequences: 438
Number of extensions: 3620
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)