Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14b23f
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   128   4e-32
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   0.93 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  128 bits (309), Expect = 4e-32
 Identities = 64/172 (37%), Positives = 97/172 (56%)
 Frame = +2

Query: 53  IFSIVIYLYTTRNHNYWAKRGVRHDPPVPFFGNHFRNVFGLKSIIELSVELYNKYPNEKV 232
           +  + +Y Y T   ++W  RGV    PVPFFG     +   KS      ++Y KY NE +
Sbjct: 13  VLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPM 72

Query: 233 VGYYRGTEPELIVRDLDIAKNILIGDFVYFHHRGLGRNTDLEPLLRNLFHVDGDAWKLLR 412
           VG Y    P L++ D ++ K+ILI DF  F +RGLG     EPL  +L +++ + W+ LR
Sbjct: 73  VGLYATRSPFLLLNDPELIKDILIRDFSKFANRGLGVFERTEPLSPHLLNLEVERWRPLR 132

Query: 413 KRLTPAFTTAKLKAMFPLVINCAEKMKSVAGEYAGRGGECDVRELMARFSTE 568
            RL+P FT+ KLK MF L+I C+  +++   +   +    + REL ARF+T+
Sbjct: 133 SRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNEPIECRELTARFTTD 184


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 3/136 (2%)
 Frame = +2

Query: 68  IYLYTTRNHNYWAKRGVRHDPPVPFFGNHFRNVFGLKSIIELSVELYNKYPNEK-VVGYY 244
           IY   +R H       +   P +P  GN   ++FG  S   +  ++  K  N K VV  +
Sbjct: 28  IYFRISRRHLLELAEKIPGPPALPLIGNAL-DLFG--SPDAMFSQVLKKAENFKDVVKIW 84

Query: 245 RGTEPELIVRDLDIAK-NILIGDFVYFHHRGLGRNTDLEPLLRN-LFHVDGDAWKLLRKR 418
            G  P+L++  +D     I++   VY       R    +P L + L    G  W+  RK 
Sbjct: 85  VG--PKLVICLIDPRDVEIILSSNVYIDKSTEYRF--FKPWLGDGLLISTGQKWRNHRKL 140

Query: 419 LTPAFTTAKLKAMFPL 466
           + P F    LK+   L
Sbjct: 141 IAPTFHLNVLKSFIDL 156


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 348 VFLPKPRWWKYTKSPINIFLAISKS 274
           VF+  PRW     S +N FL   +S
Sbjct: 63  VFITIPRWKNGVPSNLNFFLKNDES 87


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 326 HRGLGRNTDLEPLLR 370
           HRG G NTD   L R
Sbjct: 261 HRGGGTNTDARHLFR 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,092
Number of Sequences: 438
Number of extensions: 3878
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)