Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14b10f
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               26   0.33 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   1.0  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   1.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.4  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/49 (22%), Positives = 29/49 (59%)
 Frame = +1

Query: 94  IFCLLFVSLTKTSFQKSTPQDSQYVAAAVEYIVSGDVDQNIRNYVRYIE 240
           +  L+F+   +   +K   ++S+   AA++ + +GD++Q+ +N   Y++
Sbjct: 12  VITLIFLYFGEADIKKDCRKESKVSWAALKKMKAGDMEQDDQNLKCYLK 60


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 427 VVVNGRELMDCTKNDTGE 480
           +++NGR+LM C +  +G+
Sbjct: 229 IIMNGRDLMACAQTGSGK 246


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 494 SSGQGSPVSFLVQSM 450
           S+G G PVS +VQ+M
Sbjct: 183 STGMGGPVSLVVQAM 197


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 259 ADIIVFPELTLTNRSTSFVAPLHGILKQYP 348
           A +   P  T T  +++    LHGIL Q+P
Sbjct: 170 ASVKAEPGSTGTTTTSTGTRLLHGILSQHP 199


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 529 DRNGAVIDRYRKINLFGESS 588
           +RN    + +RK NL G+SS
Sbjct: 713 NRNVTTCNMFRKTNLSGDSS 732


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 487 PELKEYIFNTNVVFDRNGAV 546
           P  K+Y  ++  V DRNG +
Sbjct: 428 PRAKDYGHSSGSVIDRNGVM 447


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 322 TALQNLCFC 296
           T LQN CFC
Sbjct: 479 TILQNACFC 487


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = -2

Query: 99   KDKTFHYSLVTF--NYD 55
            K + FHYS+V F  N+D
Sbjct: 1030 KSRLFHYSVVPFVSNHD 1046


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,577
Number of Sequences: 438
Number of extensions: 3474
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)