Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14b06f
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical p... 33 0.15
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC006619-2|AAK68254.1| 434|Caenorhabditis elegans Hypothetical ... 30 1.1
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 28 4.3
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 28 4.3
U40420-9|AAA81436.1| 320|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 7.5
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical
protein F40F9.5 protein.
Length = 585
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 431 ISATIPC-VIALLVGAWSDKTGHRKVFLTISIFGQFLITINNML 559
I TIP +++ L+G WSD+ G RK L S+FG F INN +
Sbjct: 134 IMGTIPTLIVSPLIGNWSDRNG-RKSPLLFSLFGLF---INNFI 173
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +2
Query: 287 EKACRVNLNFSDEICTSLKLQDSDVNSQNQYEKETQKLLASVMAKRTYISATIPCVIALL 466
+ C VN+ + C + + ++Q +Y+++ L ++ T+I T+ IAL
Sbjct: 76 QNLCPVNMTENASKCIADHSRLFFRSAQFEYQQDCTGLNGFSLSTATFIG-TLLGNIAL- 133
Query: 467 VGAWSDKTGHRKVFLTISIFGQFLITINNML-NVYFFH 577
G +DK G R ++L+ +FG + ++ + N+Y F+
Sbjct: 134 -GFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFY 170
>AC006619-2|AAK68254.1| 434|Caenorhabditis elegans Hypothetical
protein C46C11.2 protein.
Length = 434
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 428 YISATIPCVIALLVGAWSDKTGHRKVFLTISIFGQFLITINNMLNVYFFHE 580
YI+ I CV ++ G +SD G RK + I I + ++N +N+ + E
Sbjct: 33 YINLPIACVFGIIYGGYSDHRG-RKYPMLIGILS---VLVSNAMNILMWDE 79
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 196 SNQKHDSGSKFVIPHHVQSYFNVDNAKLKLRKSLPSELKFF 318
S+Q HD+ S+ V P+H + N+ + R+ PS ++FF
Sbjct: 1054 SSQSHDNSSRTVSPNHRHHSSSYSNSCYQERE--PSHIRFF 1092
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 196 SNQKHDSGSKFVIPHHVQSYFNVDNAKLKLRKSLPSELKFF 318
S+Q HD+ S+ V P+H + N+ + R+ PS ++FF
Sbjct: 1068 SSQSHDNSSRTVSPNHRHHSSSYSNSCYQERE--PSHIRFF 1106
>U40420-9|AAA81436.1| 320|Caenorhabditis elegans Hypothetical
protein F40F4.1 protein.
Length = 320
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 479 SDKTGHRKVFLTISIFGQFLITINNMLNVYFFH 577
SD H+K+ I+IFGQ I +N LN++ H
Sbjct: 186 SDSLFHQKIMRHIAIFGQVAID-SNQLNLFVRH 217
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 279 KFCVVNIEIRLDMMRNNKLASTVMFLIRWQNL 184
K+C EI M NN+ A M IRW L
Sbjct: 134 KYCGYRSEITARMFENNREAMFKMLKIRWNTL 165
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 279 KFCVVNIEIRLDMMRNNKLASTVMFLIRWQNL 184
K+C EI M NN+ A M IRW L
Sbjct: 134 KYCGYRSEITARMFENNREAMFKMLKIRWNTL 165
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 433 FRHDTMRDRLISRSMVRQNWTQESVSDNFNIWAIPD 540
F H RD +RS+ ++ T +S + + +A+PD
Sbjct: 1591 FAHSRRRDAPFARSVSARHHTPDSEEERVDCYAVPD 1626
>AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical
protein Y4C6B.5 protein.
Length = 469
Score = 27.1 bits (57), Expect = 10.0
Identities = 27/102 (26%), Positives = 42/102 (41%)
Frame = +2
Query: 272 QNLSLEKACRVNLNFSDEICTSLKLQDSDVNSQNQYEKETQKLLASVMAKRTYISATIPC 451
QNL EK C + ++ C ++ D + Q ++ T + ++
Sbjct: 29 QNLIYEKECLIKYQQNETFCRNVSAYYDDKDIQAAANH------FYFISSLTLLCPSL-- 80
Query: 452 VIALLVGAWSDKTGHRKVFLTISIFGQFLITINNMLNVYFFH 577
V LL+GA +D K+ L I G L TIN + YF H
Sbjct: 81 VTTLLLGAATDYWSI-KIPLIIPYIGCILGTINYVFQSYFIH 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,431,308
Number of Sequences: 27780
Number of extensions: 206260
Number of successful extensions: 626
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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