Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14a18f
(587 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 42 7e-05
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 37 0.002
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 34 0.013
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 31 0.12
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 29 0.67
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 28 0.88
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 28 1.2
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 27 2.0
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 27 2.0
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.7
SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|c... 27 2.7
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 25 6.2
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 25 6.2
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 25 6.2
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 25 6.2
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 25 6.2
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 25 6.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.2
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 25 8.2
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 25 8.2
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 25 8.2
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 41.9 bits (94), Expect = 7e-05
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 262 AISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSAT-CDFRMTSAD--KGWLTAAP 432
A++ GFGR+ + L V G + + I S +L D A+ +LT +
Sbjct: 68 AMNEIGFGRYQWYLFFVAGFGWMSDNIWPVCTSLILMRLDEVDGPHPPAEGRAPYLTLSQ 127
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
LG+++G+ W ADT GR+ T L GV +I+
Sbjct: 128 NLGLLVGAMVWSLSADTIGRRWAFNLTFLFTGVFAVIA 165
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +1
Query: 310 VTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKG 489
+ GL++ I+ V+ ++ +T+ K ++T+A LG ++G G LAD G
Sbjct: 96 IGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFG 155
Query: 490 RKVVLVSTLLLDGVVGIISSFVQI 561
RK V+ + ++ I+ S VQ+
Sbjct: 156 RKPVIA----IASIIIIVGSIVQV 175
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 34.3 bits (75), Expect = 0.013
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +1
Query: 325 YANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVL 504
Y +G+ + V+P ATC + +T +P+LG++ W +A +G K +
Sbjct: 426 YLYLLMGVLVCPAVVP-ATCVMLFSRVSTIAVTVSPVLGIISSIITWLVVARAEGGKTLT 484
Query: 505 VST------LLLDGVVGIISSFVQIL 564
+ T +L VVG++S + IL
Sbjct: 485 IETTGANNPMLAGNVVGLLSPALYIL 510
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 31.1 bits (67), Expect = 0.12
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 585
MLG +G W +++ GRK L L L V I + Q + M CR
Sbjct: 184 MLGYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQDIQTIMICR 234
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 28.7 bits (61), Expect = 0.67
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Frame = +1
Query: 292 HFCLLAVTGLI-----YANTAIG--ITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVI 450
HF +AV G+ Y + +IG ITI+ + P T + D G + +G ++
Sbjct: 75 HFLNVAVAGVALMSDGYCSNSIGTVITILRKLYPEETTHNKSLQ-DIGMIA---YVGTIV 130
Query: 451 GSYFWGCLADTKGRK--------VVLVSTLLLDGVVGIISSFVQILPIFMACR 585
G +G +D GRK +++VST L G G S +L +A R
Sbjct: 131 GQLSFGWYSDRFGRKNGMITATIILIVSTALCTGAYGYKGSINGMLSALIAYR 183
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 28.3 bits (60), Expect = 0.88
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 585
+ G + G W L++ GRK+ L+ + G+ I + + + M CR
Sbjct: 180 LCGYIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAVAKDIQTIMMCR 230
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 334 TAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVST 513
+A+ T+++ +P+ + S+ W+ A L F G +++ GRK+VL ++
Sbjct: 103 SALDQTVITTAIPTIVANLDGGSS-YSWIGTAYTLAQTSILPFCGIMSEVVGRKIVLYTS 161
Query: 514 LLL 522
++L
Sbjct: 162 IVL 164
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 27.1 bits (57), Expect = 2.0
Identities = 22/98 (22%), Positives = 41/98 (41%)
Frame = +1
Query: 292 HFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGC 471
H LLA T L A+ + + + +A +T A G + + G G W
Sbjct: 99 HVALLAFTTLT-ASWGSSVFSAAATIFAAKYHIGLTVALLGM--SLYVCGFASGPILWAP 155
Query: 472 LADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 585
+++ GRK+ L+ + + + I + + + M CR
Sbjct: 156 ISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQTVMICR 193
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 2.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 585
+LG G W L++ GRK ++ +L G+ I + + + M CR
Sbjct: 181 LLGYCSGPIIWAPLSELSGRKPPILIGMLGFGIFNISVAVGKDIQTIMMCR 231
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +1
Query: 337 AIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTL 516
A+ T+++ +P+ + S+ W+ A L F G +++ GRK+VL +++
Sbjct: 104 ALDQTVITTAIPTIVANLDGGSS-YSWIGTAYSLAETSILPFCGIMSEVVGRKIVLYTSI 162
Query: 517 LL 522
+L
Sbjct: 163 VL 164
>SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|chr
3|||Manual
Length = 222
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 455 EPMTIPNIGAAVSQPLSAEVMRKSHVADGSTNDTIVIPMAVL 330
E TIP S+P +VM S VAD T + IP +L
Sbjct: 35 EEATIPQSLVKTSRPADHKVMEASKVADTRTAWSTKIPAVLL 76
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 6.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -1
Query: 533 TTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKS 384
T P + +T + F+SA +K PM I + +P S + R +
Sbjct: 49 TVPRTVLGGKSTNISKFISAPSTKKMSPMDISMDSPTILEPNSQGISRSA 98
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 6.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 25.4 bits (53), Expect = 6.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 86 WIWTCLHFSKIIFPAQKVICLY 107
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.4 bits (53), Expect = 6.2
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 182 YFKSETPSENNRKW 223
YF TP E NRKW
Sbjct: 7 YFFGPTPQEQNRKW 20
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 6.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 6.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -1
Query: 533 TTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVADGSTN 360
T P+S+RV T T S KQP T ++VS P S+ V +S S++
Sbjct: 437 TQPASTRVQTTTVSSISTSVKQP------TASVASSSVSVPSSSSVQPQSSTPISSSS 488
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 8.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -1
Query: 530 TPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKS 384
TPSS + T RPFV Q + I NI + +++R S
Sbjct: 114 TPSSEKSTTERESRPFVPPNSQQMRRMLFIGNIPKELDDFWMDKILRLS 162
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 8.2
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +1
Query: 238 EHGADFEAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGW 417
E+G FEA ++ + ++GL++ G+ + + + ++S K
Sbjct: 67 ENGEGFEAEKISSWIWVLS-AVAGISGLLFGYDT-GVISGALAVLGSDLGHVLSSGQKEL 124
Query: 418 LTAAPMLGMVIGSYFWGCLADTKGRKVVLV 507
+T+A +I + G LAD GRK +L+
Sbjct: 125 ITSATSFAALISATTSGWLADWVGRKRLLL 154
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.0 bits (52), Expect = 8.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 136 LVGAYHRHRKRHLGMRVRHRGYRERRLGDRSKD 38
LV H + +R+ H+G RLG R+KD
Sbjct: 422 LVACQTNHAVDQILIRLLHQGASVMRLGSRTKD 454
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,524,103
Number of Sequences: 5004
Number of extensions: 51542
Number of successful extensions: 151
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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