Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14a18f
(587 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 62 4e-10
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 60 1e-09
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 58 5e-09
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 51 6e-07
02_05_1340 + 35797923-35799881 38 0.006
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 36 0.024
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 36 0.024
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 36 0.032
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 35 0.055
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 34 0.073
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 32 0.30
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 32 0.30
06_01_0133 + 1027765-1028430 31 0.90
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 31 0.90
03_03_0196 + 15331604-15331646,15332141-15332260,15334106-153342... 30 1.2
03_01_0357 - 2797523-2799109 30 1.2
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 30 1.6
03_01_0355 - 2789680-2791263 30 1.6
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 29 2.1
11_01_0211 - 1660249-1660352,1660504-1660547,1660893-1660934,166... 29 2.7
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 29 2.7
03_01_0354 + 2785998-2787623 29 3.6
02_05_0264 + 27263562-27264830 29 3.6
09_03_0092 + 12306991-12307323,12308302-12308339,12308465-123092... 28 4.8
06_02_0169 - 12535102-12536062,12536949-12537646 28 4.8
03_01_0256 - 1992298-1993878 28 4.8
10_08_0183 - 15522241-15523866 28 6.3
05_05_0218 - 23367998-23368441 28 6.3
05_03_0227 + 10655204-10655269,10656333-10656393,10656570-106566... 28 6.3
04_01_0445 + 5812277-5813893 28 6.3
11_04_0293 + 15926561-15928834 27 8.4
10_08_0182 + 15513693-15515273 27 8.4
07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469 27 8.4
05_06_0248 + 26673107-26674351 27 8.4
04_01_0443 - 5776275-5777921 27 8.4
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 27 8.4
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/78 (33%), Positives = 50/78 (64%)
Frame = +1
Query: 262 AISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLG 441
A+ ++GFGR+ +L+ G+ A+ + ++SFV PS ++++TS + +T+ +G
Sbjct: 15 ALLSSGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMITSIVFVG 74
Query: 442 MVIGSYFWGCLADTKGRK 495
M+IG+Y WG ++D GR+
Sbjct: 75 MLIGAYTWGVVSDNYGRR 92
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/110 (27%), Positives = 61/110 (55%)
Frame = +1
Query: 256 EAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPM 435
+ A+ GFG+F +LA G+ + ++ I ++SFV P ++ +++ ++ L++
Sbjct: 202 DEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVF 261
Query: 436 LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 585
GM+IG+ WG ++D GR++ L+ + L +G +S+F +A R
Sbjct: 262 AGMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALR 311
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 58.0 bits (134), Expect = 5e-09
Identities = 24/87 (27%), Positives = 54/87 (62%)
Frame = +1
Query: 256 EAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPM 435
+ A+ + GFG+F +LA +G+ + A+ + ++SFV S ++ +++ + +T+
Sbjct: 35 DEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVVF 94
Query: 436 LGMVIGSYFWGCLADTKGRKVVLVSTL 516
+GM++G+Y WG ++D GR+ ++ +L
Sbjct: 95 VGMLVGAYSWGIVSDNYGRRQAVMPSL 121
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/85 (31%), Positives = 50/85 (58%)
Frame = +1
Query: 262 AISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLG 441
A++ GFGRF +LA + + A+ + ++SFV PS ++ ++ A +G +++ G
Sbjct: 22 ALTRAGFGRFQALVLAYACVGWVAEAMEVMLLSFVGPSVKAEWGVSGAAEGLVSSVVFAG 81
Query: 442 MVIGSYFWGCLADTKGRKVVLVSTL 516
M+IG+ G ++D GR L++TL
Sbjct: 82 MLIGACLGGLISDRYGRS-FLIATL 105
>02_05_1340 + 35797923-35799881
Length = 652
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/59 (28%), Positives = 36/59 (61%)
Frame = +1
Query: 409 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACR 585
+G + A ++G I + F G L+D++GR+ +L+++ LL + G++ + +PI + R
Sbjct: 46 QGLVVATSLIGATIVTTFSGPLSDSRGRRPMLIASALLYSLAGLLMLWSPNVPILLLAR 104
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +1
Query: 385 DFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQIL 564
DF +++++ G + +G +IG+ G LAD+ GRK + ++ G+VG + + +
Sbjct: 1019 DFGLSNSEYGVFGSVLTIGAMIGALTSGRLADSLGRKTTMGLAAII-GIVGWFTIYFANV 1077
Query: 565 PIFMA 579
P+F++
Sbjct: 1078 PVFIS 1082
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRK----VVLVSTLLLDGVVGIISSF 552
G++ A+ M G + S WG +AD GRK + L+S ++ + + G+ SS+
Sbjct: 139 GFVGASYMFGRALSSVIWGIVADKYGRKPIIIITLISIIIFNTLFGLSSSY 189
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLL 519
G+L A+ M+G + FWG +AD GRK V+V ++L
Sbjct: 89 GFLGASYMVGRSFAAIFWGVVADRIGRKPVIVFSIL 124
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLL 519
G+L A+ M+G S FWG +AD GRK ++ ++L
Sbjct: 58 GFLGASYMIGRCFASLFWGVVADRIGRKPIIKFSIL 93
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 34.3 bits (75), Expect = 0.073
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLL 519
G+L A+ M+G + FWG +AD GRK V++ ++L
Sbjct: 43 GFLGASYMVGRSFAAIFWGVVADRIGRKPVIMFSIL 78
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTL 516
G+L A+ M+G S WG +AD GRK V++ ++
Sbjct: 68 GFLGASYMIGRGFASILWGMVADRIGRKPVIIFSI 102
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTL 516
G+L A+ M+G S WG +AD GRK V++ ++
Sbjct: 58 GFLGASYMIGRGFASILWGMVADRIGRKPVIIFSI 92
>06_01_0133 + 1027765-1028430
Length = 221
Score = 30.7 bits (66), Expect = 0.90
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 238 EHGADFEAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSA 405
E G D +AA S++ R H +LA G A TA+ IT VS +L +F + A
Sbjct: 9 EKGKDNKAAASSSWQARRHLIVLAALGGTVAATAVVIT-VSVILRPVHVEFAVARA 63
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 409 KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFV 555
+GW+ + + G GS+ G LAD GR T +LD + + +F+
Sbjct: 92 QGWVVSTTLAGATAGSFTGGALADKFGR----TRTFILDAIPLAVGAFL 136
>03_03_0196 +
15331604-15331646,15332141-15332260,15334106-15334221,
15334661-15334749,15334885-15334927,15335567-15335741,
15335840-15335971,15336046-15336383,15336791-15337129,
15337293-15337975,15338228-15338807,15339356-15339679,
15340149-15340262
Length = 1031
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 568 WARSGRTMR*YRPRRQVVGLILIQP 494
W R GR +R +RP +Q+ G IQP
Sbjct: 915 WRRKGRGLRGFRPEKQLEGQTQIQP 939
>03_01_0357 - 2797523-2799109
Length = 528
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 418 LTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
+T + G + G F+G L D GRK V TL+L V I S
Sbjct: 73 VTGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLILMVVCSIAS 115
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 289 FHFCLLAVTGLIYANTA---IGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSY 459
+HF + + G+ + A I++V+ +L + +T + G V G
Sbjct: 21 YHFIAIVIAGMGFFTDAYDLFSISLVADLLGHVYYHGELPRNIHAAVTGIALCGTVPGQL 80
Query: 460 FWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
+G L D GRK V TLLL V + S
Sbjct: 81 VFGWLGDKMGRKRVYGITLLLMVVSSLAS 109
>03_01_0355 - 2789680-2791263
Length = 527
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 418 LTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
+T + G + G F+G L D GRK V TL+L V + S
Sbjct: 73 VTGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLILMVVCSVAS 115
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLL 519
G++ A LG I + WG AD GRK +V ++L
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRKPCIVISIL 122
>11_01_0211 -
1660249-1660352,1660504-1660547,1660893-1660934,
1661010-1661098,1661181-1661225,1661501-1661545,
1661574-1661681,1661765-1661850,1662253-1662340,
1662884-1663084,1663491-1663566,1663652-1663701,
1663783-1663845,1663924-1663977,1664093-1664195,
1664328-1664430,1664516-1664576,1664872-1664912,
1666605-1666761
Length = 519
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLV 507
G++ A+ M G + S WG AD GRK V+V
Sbjct: 84 GFVGASFMFGRCLTSTIWGIAADRIGRKPVVV 115
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/81 (22%), Positives = 37/81 (45%)
Frame = -1
Query: 521 SSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVADGSTNDTIVIP 342
++R+ T R + + + EP + ++GAA+ + A +R+ +VIP
Sbjct: 199 ATRISTLPRCRERRTQGRNTRVEPWVVEDVGAALEEHHGAVALRRDEPVRQQEEVVVVIP 258
Query: 341 MAVLA*ISPVTASRQKWKRPK 279
A A P R++ ++P+
Sbjct: 259 AAATA-RWPQPRPRERERKPR 278
>03_01_0354 + 2785998-2787623
Length = 541
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
+ G + G F+G L D GRK V TLLL + I S
Sbjct: 80 LCGTLSGQLFFGWLGDKLGRKSVYGMTLLLMVICSIAS 117
>02_05_0264 + 27263562-27264830
Length = 422
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 376 ATCDFRMTSADKGWLTAAPMLGMVIGSYF 462
AT D T+ GWL+AA LG+ I +F
Sbjct: 282 ATRDIITTNLGTGWLSAAVQLGLCINLFF 310
>09_03_0092 +
12306991-12307323,12308302-12308339,12308465-12309244,
12309386-12309875
Length = 546
Score = 28.3 bits (60), Expect = 4.8
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 232 FLEHGADFEAAISATGFGRFHF-CLLAVT-GLIYANTAIGITIVSFVLPSATCDFRMTSA 405
FL+ D + + G ++H C +A+ GL A+ + + ++ +T D +A
Sbjct: 109 FLQEYFDLDKR-NKQGHLQWHLSCQVALARGLNGIGLALVVPSIQSLVADSTEDGTRGTA 167
Query: 406 DKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMA 579
GWL A LG++ G + LA T + + +V IIS FV IL F A
Sbjct: 168 F-GWLQLASSLGLISGGFVGLLLAQT--TVFGIAGWRIAFHLVAIISVFVGILNWFFA 222
>06_02_0169 - 12535102-12536062,12536949-12537646
Length = 552
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLL 522
+LG VIG+ +G L D GR+ V + LLL
Sbjct: 75 LLGAVIGNVVFGALGDRVGRRRVYGACLLL 104
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 292 HFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGS--YFW 465
H + + L + + +G +F+LP+ R S G AA LG ++GS + W
Sbjct: 400 HAGYIVLYSLTFFSANLGPNTTTFILPAELFPARFRSTCHGLSGAAGKLGALVGSIGFLW 459
>03_01_0256 - 1992298-1993878
Length = 526
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 436 LGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
+G + G F+G L D GRK V TLLL + + S
Sbjct: 79 VGTLTGQLFFGWLGDRVGRKSVYGMTLLLMIICSVAS 115
>10_08_0183 - 15522241-15523866
Length = 541
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 439 GMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
G + G F+G L D GRK V TLL+ + I S
Sbjct: 84 GTLAGQLFFGWLGDKLGRKSVYGMTLLMMVICSIAS 119
>05_05_0218 - 23367998-23368441
Length = 147
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 359 RSCYRRRHVISA*LLRTRAGLQPRLCWVWS 448
RSC R HV+ A LR ++P LCW+ S
Sbjct: 87 RSC--RLHVVEAVFLRWLEAVKPVLCWLRS 114
>05_03_0227 +
10655204-10655269,10656333-10656393,10656570-10656672,
10656768-10656870,10656951-10657004,10657124-10657186,
10657884-10658105,10658249-10658336,10658561-10658646,
10659003-10659110,10659201-10659245,10659511-10659601,
10659662-10659765
Length = 397
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 412 GWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLL 519
G++ A+ L S WG AD GRK +V ++L
Sbjct: 40 GFVAASYFLARTFSSVPWGIFADKYGRKPCIVISIL 75
>04_01_0445 + 5812277-5813893
Length = 538
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Frame = +1
Query: 289 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL--------TAAPML 438
+HF + + G+ + A + +S V L F S G L
Sbjct: 19 YHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYYFNPASKSPGSLPPNVSAAVNGVAFC 78
Query: 439 GMVIGSYFWGCLADTKGRKVVLVSTLLL 522
G + G F+G L D GRK V TL+L
Sbjct: 79 GTLAGQLFFGWLGDKMGRKKVYGMTLML 106
>11_04_0293 + 15926561-15928834
Length = 757
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +1
Query: 403 ADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGII 543
A +G + A ++G I + F G ++D GR+ +L+++ LL G+I
Sbjct: 43 AVEGLVVAMSLIGATIITTFSGPVSDLVGRRPMLIASSLLYFAGGLI 89
>10_08_0182 + 15513693-15515273
Length = 526
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIIS 546
+ G + G F+G L D GRK V TL+L V + S
Sbjct: 78 LCGTLAGQLFFGWLGDKLGRKSVYGFTLVLMVVCSVAS 115
>07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469
Length = 198
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 33 AASLERSPRRRSLYPRWRTRIPKCRLR*R 119
A+SL R+ RRR L+P WR I C R R
Sbjct: 16 ASSLART-RRRRLFPAWRRWIRHCPRRIR 43
>05_06_0248 + 26673107-26674351
Length = 414
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 539 IPTTPSSSRVDTNTTLRPFVSAKQPQKYEPM-TIPNIGAAVSQPLSAEVMRKSHVADGST 363
+ +TP + T TT P K P+KY + T P + +AE A GS+
Sbjct: 166 VASTPCAVSTTTTTTALPPSKRKLPEKYPVVGTSPTTKTTTTSETAAERRSTKRGAGGSS 225
Query: 362 NDT 354
+ T
Sbjct: 226 SIT 228
>04_01_0443 - 5776275-5777921
Length = 548
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Frame = +1
Query: 289 FHFCLLAVTGLIYANTAIGITIVSFV--LPSATCDFRMTSADKGWL--------TAAPML 438
+HF + + G+ + A + +S V L F S G L
Sbjct: 19 YHFTAVVIAGMGFFTDAYDLFSISLVTKLLGRIYYFNPASKSPGSLPPNVSAAVNGVAFC 78
Query: 439 GMVIGSYFWGCLADTKGRKVVLVSTLLL 522
G + G F+G L D GRK V TL+L
Sbjct: 79 GTLAGQLFFGWLGDKMGRKKVYGMTLML 106
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -2
Query: 118 RHRKRHLGMRVRHRGYRERRLGDRSKD 38
RHR R R RHR RERR DR +D
Sbjct: 75 RHRDRDKD-RDRHRSSRERRDRDRDRD 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,740,545
Number of Sequences: 37544
Number of extensions: 393214
Number of successful extensions: 1106
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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