Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14a04r
         (758 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0691 + 5696230-5696289,5697942-5698025,5699420-5699450,569...    30   2.3  
04_02_0022 - 8645919-8646697,8646819-8646875,8653799-8654318           28   9.3  

>11_01_0691 +
           5696230-5696289,5697942-5698025,5699420-5699450,
           5699615-5699739
          Length = 99

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -1

Query: 176 RWAFIVKKDCSLFLNLVQHHICASTINNVNTYQAIKTNVTDIILYEI 36
           ++AFI +   S F  ++++ +  STIN V+  Q +K   T++   E+
Sbjct: 52  KYAFITEDQKSGFRQIIRNILLNSTINVVSQQQTVKRKATELAWSEL 98


>04_02_0022 - 8645919-8646697,8646819-8646875,8653799-8654318
          Length = 451

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +1

Query: 682 IVVENEQSNPNTGSKQYLCENC 747
           ++V+ +QSN ++G +Q +C NC
Sbjct: 375 VLVQQDQSNNSSGREQQVCFNC 396


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,421,469
Number of Sequences: 37544
Number of extensions: 289307
Number of successful extensions: 441
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)