Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14a04r
         (758 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   5.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.4  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 446 VGLIKTTITVCSRDCTYFIIIPLLKNPKAN*IAINTMLIF 327
           +G  +T IT  S   TYF+    L    +N I  N+ +IF
Sbjct: 3   IGNNETNITNSSITETYFVSAYNLNQEDSNWIITNSFIIF 42


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 363 SKLNCNKYYANILLN 319
           +++ C KYY NI++N
Sbjct: 319 TQVECYKYYGNIMVN 333


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 650 NLNETMVFNDLLL*KMSSPTPIP 718
           N+ ETM    LLL K++   P+P
Sbjct: 651 NMIETMELTSLLLTKVAEDRPLP 673


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 111 CLYNKQCKHLPGNKNEC 61
           C  N+QC  L  N+N C
Sbjct: 55  CTKNQQCSILRINRNRC 71


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 111 CLYNKQCKHLPGNKNEC 61
           C  N+QC  L  N+N C
Sbjct: 104 CTKNQQCSILRINRNRC 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,712
Number of Sequences: 438
Number of extensions: 4489
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)