Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13p22r
         (719 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L29277-1|AAA58374.1|  770|Homo sapiens DNA-binding protein protein.    30   9.6  
BC014482-1|AAH14482.1|  770|Homo sapiens signal transducer and a...    30   9.6  
BC000627-1|AAH00627.1|  769|Homo sapiens signal transducer and a...    30   9.6  
AY572796-1|AAS66986.1|  769|Homo sapiens signal transducer and a...    30   9.6  
AJ012463-1|CAA10032.1|  770|Homo sapiens transcription factor pr...    30   9.6  
AF029311-1|AAB84254.1|  141|Homo sapiens signal transducer and a...    30   9.6  

>L29277-1|AAA58374.1|  770|Homo sapiens DNA-binding protein protein.
          Length = 770

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 177 SIIRPRSKQITGLYNNVYLLYIVSKEREKAFKNTR 281
           +II    K I  L+N  Y++  +SKERE+A  +T+
Sbjct: 567 NIIDLVKKYILALWNEGYIMGFISKERERAILSTK 601


>BC014482-1|AAH14482.1|  770|Homo sapiens signal transducer and
           activator of transcription 3 (acute-phase response
           factor protein.
          Length = 770

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 177 SIIRPRSKQITGLYNNVYLLYIVSKEREKAFKNTR 281
           +II    K I  L+N  Y++  +SKERE+A  +T+
Sbjct: 567 NIIDLVKKYILALWNEGYIMGFISKERERAILSTK 601


>BC000627-1|AAH00627.1|  769|Homo sapiens signal transducer and
           activator of transcription 3 (acute-phase response
           factor protein.
          Length = 769

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 177 SIIRPRSKQITGLYNNVYLLYIVSKEREKAFKNTR 281
           +II    K I  L+N  Y++  +SKERE+A  +T+
Sbjct: 567 NIIDLVKKYILALWNEGYIMGFISKERERAILSTK 601


>AY572796-1|AAS66986.1|  769|Homo sapiens signal transducer and
           activator of transcription 3 (acute-phase response
           factor protein.
          Length = 769

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 177 SIIRPRSKQITGLYNNVYLLYIVSKEREKAFKNTR 281
           +II    K I  L+N  Y++  +SKERE+A  +T+
Sbjct: 567 NIIDLVKKYILALWNEGYIMGFISKERERAILSTK 601


>AJ012463-1|CAA10032.1|  770|Homo sapiens transcription factor
           protein.
          Length = 770

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 177 SIIRPRSKQITGLYNNVYLLYIVSKEREKAFKNTR 281
           +II    K I  L+N  Y++  +SKERE+A  +T+
Sbjct: 567 NIIDLVKKYILALWNEGYIMGFISKERERAILSTK 601


>AF029311-1|AAB84254.1|  141|Homo sapiens signal transducer and
           activator of transcription 3 protein.
          Length = 141

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 177 SIIRPRSKQITGLYNNVYLLYIVSKEREKAFKNTR 281
           +II    K I  L+N  Y++  +SKERE+A  +T+
Sbjct: 4   NIIDLVKKYILALWNEGYIMGFISKERERAILSTK 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,240,928
Number of Sequences: 237096
Number of extensions: 1677298
Number of successful extensions: 3139
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3137
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)