Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13p21r
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   1.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   7.9  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 126 RFYRLNNNLWHSHQPYLFRNMK 191
           R +R+ NNL++ + PY   N+K
Sbjct: 217 RSWRITNNLFYPYPPYGTFNIK 238


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 617 KEPIFYMTAYNIIRYIV 567
           ++P FYM   NI+ Y +
Sbjct: 416 RDPAFYMLYQNILSYFL 432


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 349 ITSYTFFNLGCSLI 390
           ITSY   NL CSL+
Sbjct: 74  ITSYHRINLKCSLV 87


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +3

Query: 546 TKYQIHLNNISDN---IVSSHVKYWFFFLFYGNI 638
           TKY IHL  I D    ++ +++ + +  L  G I
Sbjct: 105 TKYLIHLKEIEDTEPILLIAYIYHLYMGLLSGGI 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,722
Number of Sequences: 438
Number of extensions: 3175
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)