Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13p21f
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68317-1|CAA92686.1|  214|Caenorhabditis elegans Hypothetical pr...   167   5e-42
AB000919-1|BAA22597.1|  214|Caenorhabditis elegans VHA-4 protein.     167   5e-42
Z29095-6|CAA82354.1|  169|Caenorhabditis elegans Hypothetical pr...    62   4e-10
AB000917-1|BAA22595.1|  169|Caenorhabditis elegans VHA-1 protein.      62   4e-10
Z29095-3|CAA82355.1|  161|Caenorhabditis elegans Hypothetical pr...    59   3e-09
AC024762-4|AAF59473.1|  161|Caenorhabditis elegans Vacuolar h at...    59   3e-09
AB009566-1|BAA75066.1|  161|Caenorhabditis elegans Vha3 protein ...    59   3e-09
AB000918-1|BAA22596.1|  161|Caenorhabditis elegans VHA-2 protein.      59   3e-09
AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine r...    31   0.63 
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass...    29   2.5  
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass...    29   2.5  
AF036705-2|AAM98021.1|  237|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF036705-1|AAB95170.1|  249|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z69718-2|CAA93536.1|  139|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF385631-1|AAK84832.1|  671|Caenorhabditis elegans serotonin reu...    28   4.4  
AC024812-6|AAF59549.2|  671|Caenorhabditis elegans Modulation of...    28   4.4  
AF038608-10|AAC25814.2|  327|Caenorhabditis elegans Serpentine r...    28   5.9  
Z83238-1|CAB05792.1|  339|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z81139-7|CAI46624.1|  358|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U80023-15|AAG24046.1|  343|Caenorhabditis elegans Serpentine rec...    27   7.7  
AL034365-6|CAA22263.1|  347|Caenorhabditis elegans Hypothetical ...    27   7.7  
AF040642-9|AAB94950.1|  589|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z68317-1|CAA92686.1|  214|Caenorhabditis elegans Hypothetical
           protein T01H3.1 protein.
          Length = 214

 Score =  167 bits (406), Expect = 5e-42
 Identities = 79/140 (56%), Positives = 106/140 (75%), Gaps = 5/140 (3%)
 Frame = +3

Query: 195 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 374
           L+Y+L+G+G +  +GWFL +TSP+MW  LGI FS++LSV+GA  GI TTG SI+GGGVKA
Sbjct: 26  LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKA 85

Query: 375 PRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGYVM 539
           PRI+TKNL+S+IFCEAVAI+G+I A V  G L ++     P T   +++  +N  +GY++
Sbjct: 86  PRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMI 145

Query: 540 FGAGLAVGLVNLFCGIAVGI 599
           FG GL VGL NL CG+AVGI
Sbjct: 146 FGGGLTVGLSNLVCGLAVGI 165


>AB000919-1|BAA22597.1|  214|Caenorhabditis elegans VHA-4 protein.
          Length = 214

 Score =  167 bits (406), Expect = 5e-42
 Identities = 79/140 (56%), Positives = 106/140 (75%), Gaps = 5/140 (3%)
 Frame = +3

Query: 195 LYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKA 374
           L+Y+L+G+G +  +GWFL +TSP+MW  LGI FS++LSV+GA  GI TTG SI+GGGVKA
Sbjct: 26  LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKA 85

Query: 375 PRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSE---PFT--SVSVKQQNWMAGYVM 539
           PRI+TKNL+S+IFCEAVAI+G+I A V  G L ++     P T   +++  +N  +GY++
Sbjct: 86  PRIRTKNLVSIIFCEAVAIFGIIMAFVFVGKLAEFRREDLPDTEDGMAILARNLASGYMI 145

Query: 540 FGAGLAVGLVNLFCGIAVGI 599
           FG GL VGL NL CG+AVGI
Sbjct: 146 FGGGLTVGLSNLVCGLAVGI 165


>Z29095-6|CAA82354.1|  169|Caenorhabditis elegans Hypothetical
           protein R10E11.8 protein.
          Length = 169

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%)
 Frame = +3

Query: 270 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 449
           +G+LG+  ++A +  G+A G    G  I    V  P +  K +I V+    VAIYGL+ A
Sbjct: 25  FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84

Query: 450 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGI 599
           +++SG +E     +T  +   Q        F  GL  GL  L  G A+GI
Sbjct: 85  VIVSGKVEPAGANYTINNAFSQ--------FAGGLVCGLCGLGAGYAIGI 126



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +3

Query: 159 VLLVGLAIPIFSLYY--VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGI 332
           V++ G+ + I+ L    +++GK E     + + N      G L       L  +GA   I
Sbjct: 70  VVMAGI-VAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGL----VCGLCGLGAGYAI 124

Query: 333 HTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 458
              G + V    + PR+    ++ +IF E + +YG+I A++L
Sbjct: 125 GIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166


>AB000917-1|BAA22595.1|  169|Caenorhabditis elegans VHA-1 protein.
          Length = 169

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 36/110 (32%), Positives = 54/110 (49%)
 Frame = +3

Query: 270 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 449
           +G+LG+  ++A +  G+A G    G  I    V  P +  K +I V+    VAIYGL+ A
Sbjct: 25  FGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVA 84

Query: 450 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGI 599
           +++SG +E     +T  +   Q        F  GL  GL  L  G A+GI
Sbjct: 85  VIVSGKVEPAGANYTINNAFSQ--------FAGGLVCGLCGLGAGYAIGI 126



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +3

Query: 159 VLLVGLAIPIFSLYY--VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGI 332
           V++ G+ + I+ L    +++GK E     + + N      G L       L  +GA   I
Sbjct: 70  VVMAGI-VAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGL----VCGLCGLGAGYAI 124

Query: 333 HTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 458
              G + V    + PR+    ++ +IF E + +YG+I A++L
Sbjct: 125 GIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166


>Z29095-3|CAA82355.1|  161|Caenorhabditis elegans Hypothetical
           protein R10E11.2 protein.
          Length = 161

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 39/110 (35%), Positives = 55/110 (50%)
 Frame = +3

Query: 270 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 449
           +G +G A +   +V+GAA G   + V I   GV  P +  K++I VI    + IYGL+ A
Sbjct: 17  FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76

Query: 450 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGI 599
           +VL G +       TS S    +   G+    AGL  GL  L  G A+GI
Sbjct: 77  MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +3

Query: 147 SYLFVLLVGLAIPIFSLYY--VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGA 320
           S + V++ G+ I I+ L    VL GK    S G+ L     +    L    +  L  +GA
Sbjct: 58  SVIPVIMAGI-IGIYGLVVAMVLKGKVTSASAGYDLNKGFAH----LAAGLTCGLCGLGA 112

Query: 321 AMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 458
              I   G + V G  + PR+    ++ +IF E + +YG+I A++L
Sbjct: 113 GYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158


>AC024762-4|AAF59473.1|  161|Caenorhabditis elegans Vacuolar h
           atpase protein 3 protein.
          Length = 161

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 39/110 (35%), Positives = 55/110 (50%)
 Frame = +3

Query: 270 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 449
           +G +G A +   +V+GAA G   + V I   GV  P +  K++I VI    + IYGL+ A
Sbjct: 17  FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76

Query: 450 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGI 599
           +VL G +       TS S    +   G+    AGL  GL  L  G A+GI
Sbjct: 77  MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +3

Query: 147 SYLFVLLVGLAIPIFSLYY--VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGA 320
           S + V++ G+ I I+ L    VL GK    S G+ L     +    L    +  L  +GA
Sbjct: 58  SVIPVIMAGI-IGIYGLVVAMVLKGKVTSASAGYDLNKGFAH----LAAGLTCGLCGLGA 112

Query: 321 AMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 458
              I   G + V G  + PR+    ++ +IF E + +YG+I A++L
Sbjct: 113 GYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158


>AB009566-1|BAA75066.1|  161|Caenorhabditis elegans Vha3 protein
           protein.
          Length = 161

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 39/110 (35%), Positives = 55/110 (50%)
 Frame = +3

Query: 270 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 449
           +G +G A +   +V+GAA G   + V I   GV  P +  K++I VI    + IYGL+ A
Sbjct: 17  FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76

Query: 450 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGI 599
           +VL G +       TS S    +   G+    AGL  GL  L  G A+GI
Sbjct: 77  MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +3

Query: 147 SYLFVLLVGLAIPIFSLYY--VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGA 320
           S + V++ G+ I I+ L    VL GK    S G+ L     +    L    +  L  +GA
Sbjct: 58  SVIPVIMAGI-IGIYGLVVAMVLKGKVTSASAGYDLNKGFAH----LAAGLTCGLCGLGA 112

Query: 321 AMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 458
              I   G + V G  + PR+    ++ +IF E + +YG+I A++L
Sbjct: 113 GYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158


>AB000918-1|BAA22596.1|  161|Caenorhabditis elegans VHA-2 protein.
          Length = 161

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 39/110 (35%), Positives = 55/110 (50%)
 Frame = +3

Query: 270 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 449
           +G +G A +   +V+GAA G   + V I   GV  P +  K++I VI    + IYGL+ A
Sbjct: 17  FGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVA 76

Query: 450 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGI 599
           +VL G +       TS S    +   G+    AGL  GL  L  G A+GI
Sbjct: 77  MVLKGKV-------TSASA-GYDLNKGFAHLAAGLTCGLCGLGAGYAIGI 118



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
 Frame = +3

Query: 147 SYLFVLLVGLAIPIFSLYY--VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVGA 320
           S + V++ G+ I I+ L    VL GK    S G+ L     +    L    +  L  +GA
Sbjct: 58  SVIPVIMAGI-IGIYGLVVAMVLKGKVTSASAGYDLNKGFAH----LAAGLTCGLCGLGA 112

Query: 321 AMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 458
              I   G + V G  + PR+    ++ +IF E + +YG+I A++L
Sbjct: 113 GYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVALIL 158


>AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine
           receptor, class t protein8 protein.
          Length = 350

 Score = 31.1 bits (67), Expect = 0.63
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
 Frame = +3

Query: 138 YFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAFSVA----- 302
           YFL +L VL + L IP++ L  VL+   + +SL   + + +  ++  +GI+F        
Sbjct: 52  YFLCFLAVLKLNLKIPVYQLMLVLS-IFDILSLS--VNSVATGIFDIIGISFCQCPHAIF 108

Query: 303 -LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLS 461
            L  +G A  +  +  SI+    +   I  K ++  +F + V    L T I+ S
Sbjct: 109 FLGAIGQASWMSGSACSILLAVERCVEINPKFILERLFRKRVFCCVLATIIIYS 162


>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 279, isoform a protein.
          Length = 1020

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
 Frame = -2

Query: 596 TNSNSTE*IHQANSESSAEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTVNGDGL 417
           +N   ++   Q  +    E  +S      L  + +    + +QHT    SS  T +GD  
Sbjct: 188 SNDKLSDMTEQIGNNQHLEKLISEKTEKSLSDNETTLKPVPVQHTNSVGSSIGTTSGDSE 247

Query: 416 AEDDGDQIL-----SLDSRCFDTSSHYADTSSV 333
             DD  +       SLD +   TSS + +T+SV
Sbjct: 248 ISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 280


>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 279, isoform b protein.
          Length = 1061

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
 Frame = -2

Query: 596 TNSNSTE*IHQANSESSAEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTVNGDGL 417
           +N   ++   Q  +    E  +S      L  + +    + +QHT    SS  T +GD  
Sbjct: 229 SNDKLSDMTEQIGNNQHLEKLISEKTEKSLSDNETTLKPVPVQHTNSVGSSIGTTSGDSE 288

Query: 416 AEDDGDQIL-----SLDSRCFDTSSHYADTSSV 333
             DD  +       SLD +   TSS + +T+SV
Sbjct: 289 ISDDDQKSWSPKNESLDYQPASTSSEFTETTSV 321


>AF036705-2|AAM98021.1|  237|Caenorhabditis elegans Hypothetical
           protein F37C4.4b protein.
          Length = 237

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 21/97 (21%), Positives = 47/97 (48%)
 Frame = +3

Query: 303 LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYS 482
           ++ V A + + T  + +  G V   R +T  ++ ++FC   A+  L+  I     L+ YS
Sbjct: 92  MNTVSAIVSLLTGAMGL--GAVHRYRWRTMLILWLVFCIMSAVGSLLAVITTGIWLDHYS 149

Query: 483 EPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAV 593
           +    V     N ++G+++  A +A+G+  +   + +
Sbjct: 150 K--MKVRTAIGNGLSGFMLL-ASVALGVCFILTAVMI 183


>AF036705-1|AAB95170.1|  249|Caenorhabditis elegans Hypothetical
           protein F37C4.4a protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 21/97 (21%), Positives = 47/97 (48%)
 Frame = +3

Query: 303 LSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYS 482
           ++ V A + + T  + +  G V   R +T  ++ ++FC   A+  L+  I     L+ YS
Sbjct: 104 MNTVSAIVSLLTGAMGL--GAVHRYRWRTMLILWLVFCIMSAVGSLLAVITTGIWLDHYS 161

Query: 483 EPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAV 593
           +    V     N ++G+++  A +A+G+  +   + +
Sbjct: 162 K--MKVRTAIGNGLSGFMLL-ASVALGVCFILTAVMI 195


>Z69718-2|CAA93536.1|  139|Caenorhabditis elegans Hypothetical
           protein W06D11.3 protein.
          Length = 139

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -2

Query: 440 QTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 279
           +TV+ +   + DG++I S ++      +H  DTSS D  G +D+   N K   E
Sbjct: 82  ETVDAEN-EQQDGEKIAS-NTGDAPNITHLVDTSSSDIAGTTDSNNNNDKKTEE 133


>AF385631-1|AAK84832.1|  671|Caenorhabditis elegans serotonin
           reuptake transporter protein.
          Length = 671

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 144 LSYLFVLLVGLAIPIFSLYYVLNGKG 221
           L +   LL  LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627


>AC024812-6|AAF59549.2|  671|Caenorhabditis elegans Modulation of
           locomotion defectiveprotein 5 protein.
          Length = 671

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 144 LSYLFVLLVGLAIPIFSLYYVLNGKG 221
           L +   LL  LAIP+F++ Y+L+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627


>AF038608-10|AAC25814.2|  327|Caenorhabditis elegans Serpentine
           receptor, class z protein78 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 114 GIWCCFYPLIPKGTAFFRPIFALTRKLKTERSC 16
           G    FY L+   TAF+ PI   TRK  + ++C
Sbjct: 198 GFVALFYVLLFLSTAFYIPIMIRTRKFASIQNC 230


>Z83238-1|CAB05792.1|  339|Caenorhabditis elegans Hypothetical
           protein T08G3.1 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 18/106 (16%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
 Frame = +3

Query: 267 MWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLIT 446
           ++ T+G+ F++   ++  A G+H+   + +      P   +K  ++V+     ++Y    
Sbjct: 46  LFSTVGVLFALLEFLLYPASGLHSHSAAYIVYINNRPFDASKEFLTVLLAVYCSLYCAAI 105

Query: 447 AIVLSGMLEKYSEPFTSVSVKQQN------WMAGYVMFGAGLAVGL 566
           +++    + +Y   F  + +K  N      W+   V+ G    +G+
Sbjct: 106 SLLAVQFIYRYIAVFCPIHLKYFNKCYLLIWIFYAVLIGVEWGIGI 151


>Z81139-7|CAI46624.1|  358|Caenorhabditis elegans Hypothetical
           protein W05H5.5 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 111 YLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 209
           Y++  LK+R F   L++L    +IP+F L+YVL
Sbjct: 50  YVHVTLKIRLFHRNLYIL----SIPVFFLWYVL 78


>U80023-15|AAG24046.1|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein200 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 96  KNSTKYLNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVL 209
           KN+      NL+ ++F++ L  L+V L    F  +YVL
Sbjct: 229 KNTMSRRTFNLQRKFFITLLIQLIVPLVFFFFPSFYVL 266


>AL034365-6|CAA22263.1|  347|Caenorhabditis elegans Hypothetical
           protein Y69E1A.6 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
 Frame = +3

Query: 114 LNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISLGWFLENTSPYMWGTLGIAF 293
           L+ +++M  FL  L++ +  +   I + Y+V++  G+       L + S   W  + +  
Sbjct: 94  LSSHIQMAMFLLLLYLQVASIVCAIVTKYHVVSNIGK-------LSDRSILFWIFVIVYH 146

Query: 294 SVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTK--NLISVIFCEAVAIYGL 440
             A  + G         VS +    +   IKTK  N ISV   E VAIY L
Sbjct: 147 GCAFVITGFF------SVSCLARQEEENLIKTKFPNAISVFTLENVAIYDL 191


>AF040642-9|AAB94950.1|  589|Caenorhabditis elegans Hypothetical
           protein C50D2.2 protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = +3

Query: 276 TLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIV 455
           ++G  F +  S+VG    +     S+   G+    + + N  + +  +A+ I+G +TAI+
Sbjct: 320 SVGALFGMTTSLVGGMFALPRCVFSMADDGLLFSSLASVNPKTQVPTQALLIFGFLTAII 379


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,670,581
Number of Sequences: 27780
Number of extensions: 326808
Number of successful extensions: 1139
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)