Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13p21f
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 71 9e-15
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 1.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 1.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 1.3
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.0
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 3.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.0
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 7.0
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 7.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.0
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 21 9.2
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 70.9 bits (166), Expect = 9e-15
Identities = 41/110 (37%), Positives = 59/110 (53%)
Frame = +3
Query: 270 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 449
+G +G A ++ S +GAA G +G I V P + K++I V+ +AIYGL+ A
Sbjct: 13 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 72
Query: 450 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCGIAVGI 599
++++G LE EP K G+V GAGLAVG L G A+GI
Sbjct: 73 VLIAGGLE---EP------KGYTLFKGFVHLGAGLAVGFSGLAAGFAIGI 113
Score = 39.1 bits (87), Expect = 3e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 279 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 458
LG +V S + A I G + V G + PR+ ++ +IF E + +YGLI AI L
Sbjct: 94 LGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 153
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 521 DGGIRDVRRWTRCWLG 568
DGG ++ W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 521 DGGIRDVRRWTRCWLG 568
DGG ++ W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 521 DGGIRDVRRWTRCWLG 568
DGG ++ W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 464 TREHDSSDQTVNGDGLAE 411
TREH S + T++ DG+ E
Sbjct: 349 TREHPSRNFTMSEDGMIE 366
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 22.6 bits (46), Expect = 3.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 9/49 (18%)
Frame = +3
Query: 141 FLSYL-FVLLVGLAIPIFSLYYVLNG--------KGEQISLGWFLENTS 260
F S+L F+LLV +A+ +++ V N K ++I G+FL + S
Sbjct: 84 FASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSES 132
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -3
Query: 595 PTAIPQNRFTKPTASPAPN 539
P PQ FT P P PN
Sbjct: 1124 PQLKPQKPFTSPGGIPGPN 1142
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 326 HGCSDNGQGNGKGDS 282
+G +DNG GNG ++
Sbjct: 252 NGANDNGNGNGASNN 266
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 308 GQGNGKGDSEGTPHIRG 258
G+G+GKG S G RG
Sbjct: 83 GRGHGKGGSRGRGGNRG 99
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 156 FVLLVGLAIPIFSLYYVL 209
F +L G+A+ +LYY L
Sbjct: 5 FEILCGIAVLFLALYYYL 22
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +3
Query: 129 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 236
K ++ L + VG++ ++Y+ + GE++SL
Sbjct: 235 KTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSL 270
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 129 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 236
K ++ L + VG+ ++Y+ + GE++SL
Sbjct: 248 KTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSL 283
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -3
Query: 496 LVNGSEYFSSIPESTIAVI 440
L ++YF++ P +T+AV+
Sbjct: 130 LAIAAQYFNAKPSATVAVL 148
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,905
Number of Sequences: 438
Number of extensions: 4332
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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