Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13p19f
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL031633-6|CAA21014.3| 225|Caenorhabditis elegans Hypothetical ... 41 8e-04
AF039047-4|AAB94225.1| 224|Caenorhabditis elegans Hypothetical ... 40 0.001
Z70755-4|CAA94783.2| 239|Caenorhabditis elegans Hypothetical pr... 34 0.067
Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical p... 30 1.5
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical... 28 4.4
AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical... 28 4.4
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 5.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 5.9
Z81111-3|CAB03267.1| 334|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ... 27 7.7
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ... 27 7.7
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z70306-1|CAA94322.1| 355|Caenorhabditis elegans Hypothetical
protein C06G8.1 protein.
Length = 355
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +3
Query: 273 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 452
++ +A F T+G F G IC I+K+ T+ I PFL GVV + YG++ D T+
Sbjct: 14 LLSILAFFTTVGLFFCGIPICRQIWKRKDTKEISGAPFLMGVVGGCCWMTYGWLKNDGTV 73
Query: 453 IQVNMFGLALNIVYVLIYFNYTQQKVKVWAQI-GLAGAVSAALI 581
V + L Y + Y+ T++K+ + ++ G+ G ++ ++
Sbjct: 74 KWVTGCQVILYTTYTIFYWCMTKKKLYISLKVLGVIGICTSLVL 117
>AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical
protein K02D7.5 protein.
Length = 299
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/110 (29%), Positives = 52/110 (47%)
Frame = +3
Query: 252 ILQPYKEIVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGY 431
+L+ +++ A TI F G IC I +QG+ I +PFL GV+ L+YG
Sbjct: 1 MLEVVLQVLSISAITTTIALFFCGIPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGL 60
Query: 432 ILRDDTMIQVNMFGLALNIVYVLIYFNYTQQKVKVWAQIGLAGAVSAALI 581
+ D MI VN+ G+A Y + + Y+ K Q+ L + ++
Sbjct: 61 LKMDYVMIIVNVVGVACMAFYCVFFLIYSLPKKTFTCQLILVTSTIGGMV 110
>AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical
protein C54F6.4 protein.
Length = 233
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/84 (23%), Positives = 41/84 (48%)
Frame = +3
Query: 330 ICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVLIYF 509
IC IY+QG I PFL G ++ L+YG++ D +I +N G+ + + + +
Sbjct: 17 ICLQIYRQGHVGDISGFPFLMGTLVLPFWLRYGFLRNDVMLISINCAGIPIAVFNAMFFL 76
Query: 510 NYTQQKVKVWAQIGLAGAVSAALI 581
+++ K Q+ + + ++
Sbjct: 77 YFSKPKKYYMTQLSIVTIIILTML 100
>AL031633-6|CAA21014.3| 225|Caenorhabditis elegans Hypothetical
protein Y39A1A.8 protein.
Length = 225
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 300 TIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLA 479
T+ G IC I +GS+ G PFL + L +QYG + DD + N G
Sbjct: 21 TVAFFLCGLQICHRIKTRGSSEGTSPAPFLLSFLSCGLFIQYGLLKDDDVITYCNGIGCF 80
Query: 480 LNIVYVLIYFNYTQQK 527
L Y++ ++ T+ +
Sbjct: 81 LQACYLMYFYYMTRNR 96
>AF039047-4|AAB94225.1| 224|Caenorhabditis elegans Hypothetical
protein K11D12.5 protein.
Length = 224
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/99 (25%), Positives = 43/99 (43%)
Frame = +3
Query: 300 TIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLA 479
+IG F F+ D +K+G+ G + F+ +++ L++GY+ D T I +N L
Sbjct: 14 SIGFTFLPMFMVLDWHKRGTADGFSSVNFVLPMLVQSFWLRHGYMTNDQTNIIINSINLV 73
Query: 480 LNIVYVLIYFNYTQQKVKVWAQIGLAGAVSAALIGYAQT 596
YV + Y ++ + QI A Y T
Sbjct: 74 FFAFYVSAFAYYQPKRKYLIGQIVAAALAVKVAFAYVDT 112
>Z70755-4|CAA94783.2| 239|Caenorhabditis elegans Hypothetical
protein K06A4.4 protein.
Length = 239
Score = 34.3 bits (75), Expect = 0.067
Identities = 16/65 (24%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 378 MPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVL-IYFNYTQQKVKVWAQIGL 554
+P++ V+ + L L+Y LRD +I + + +++ + +V+ + F T+++ + G+
Sbjct: 60 IPYICAVIGSALWLRYSIFLRDTKLILLQTYAVSMQLFFVIALIFYRTKRRKLIRLMTGI 119
Query: 555 AGAVS 569
A A+S
Sbjct: 120 AAALS 124
>Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 437 P*RHHDSSQHVRSGLKYRLR---ADILQLHPAEGQGLGSDRSG 556
P H S+ HVRSG++ + R A +L L P G G+G+ G
Sbjct: 312 PSEHLLSNGHVRSGIRDKARGVAASLLSLLPRPGSGVGNGGPG 354
>Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 437 P*RHHDSSQHVRSGLKYRLR---ADILQLHPAEGQGLGSDRSG 556
P H S+ HVRSG++ + R A +L L P G G+G+ G
Sbjct: 312 PSEHLLSNGHVRSGIRDKARGVAASLLSLLPRPGSGVGNGGPG 354
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -1
Query: 355 PCLYMSQHMKLPENICPMVTKAAIEPTI--SLYG*RISAKASILEDLCFIYWCLKLHSLR 182
PC++ Q L EN+CP A P + ++Y +I A S C+ L
Sbjct: 1016 PCVFQFQEYCLGENLCPFPNPVAACPALDSTIYTYKIEASPSFHVFQIIDVECVNSAMLM 1075
Query: 181 LGR 173
+GR
Sbjct: 1076 IGR 1078
>AC024791-12|AAT81181.1| 401|Caenorhabditis elegans Hypothetical
protein Y47G6A.7b protein.
Length = 401
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 357 STRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVLIY 506
+T GI + F G+V + L +I+ DT+ ++N+ GL L + +L++
Sbjct: 327 NTSGITLNIF--GIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLH 374
>AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical
protein Y47G6A.7a protein.
Length = 410
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 357 STRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIVYVLIY 506
+T GI + F G+V + L +I+ DT+ ++N+ GL L + +L++
Sbjct: 327 NTSGITLNIF--GIVKEVATLLLAHIVNKDTLTELNICGLVLCLSGMLLH 374
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 408 ILNLQYGYILRDDTMIQVNMFGLALNIVYVLI 503
+++L+ G ILR++ V FG L++V VLI
Sbjct: 19 VIDLKAGAILRENARKSVLFFGCPLSVVLVLI 50
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 450
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 450
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 450
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 328 SYAGTYTSRAALAGSASCRSSEVLL*--PSSTCNMVTYSVTTP 450
++ T T+ + S +C+++ VL P TC M+ S TTP
Sbjct: 350 TFPPTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTP 392
>Z81111-3|CAB03267.1| 334|Caenorhabditis elegans Hypothetical
protein T01G5.3 protein.
Length = 334
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 378 MPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLAL 482
+P +GG +N+ + YI++DD +Q+ + + L
Sbjct: 10 IPKVGGACSFFINVLFIYIVQDDKKVQIGNYKILL 44
>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 335 AYETAGEHLPNGYEGRYRAHYLFVRLKN 252
A+E G+H+ + Y GR H +L+N
Sbjct: 465 AFEEVGQHVRSAYAGRLAKHSFSAKLQN 492
>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 335 AYETAGEHLPNGYEGRYRAHYLFVRLKN 252
A+E G+H+ + Y GR H +L+N
Sbjct: 429 AFEEVGQHVRSAYAGRLAKHSFSAKLQN 456
>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 335 AYETAGEHLPNGYEGRYRAHYLFVRLKN 252
A+E G+H+ + Y GR H +L+N
Sbjct: 468 AFEEVGQHVRSAYAGRLAKHSFSAKLQN 495
>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 335 AYETAGEHLPNGYEGRYRAHYLFVRLKN 252
A+E G+H+ + Y GR H +L+N
Sbjct: 465 AFEEVGQHVRSAYAGRLAKHSFSAKLQN 492
>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 335 AYETAGEHLPNGYEGRYRAHYLFVRLKN 252
A+E G+H+ + Y GR H +L+N
Sbjct: 429 AFEEVGQHVRSAYAGRLAKHSFSAKLQN 456
>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 335 AYETAGEHLPNGYEGRYRAHYLFVRLKN 252
A+E G+H+ + Y GR H +L+N
Sbjct: 468 AFEEVGQHVRSAYAGRLAKHSFSAKLQN 495
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,605,834
Number of Sequences: 27780
Number of extensions: 255983
Number of successful extensions: 673
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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