Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13p13f
(606 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 30 0.23
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 29 0.40
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 1.6
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 26 4.9
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 4.9
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 25 6.5
SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces pombe... 25 6.5
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 6.5
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 25 6.5
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 25 6.5
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom... 25 6.5
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 6.5
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 25 8.6
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 25 8.6
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 25 8.6
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 30.3 bits (65), Expect = 0.23
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +3
Query: 48 KSEFQLS-NFNLNHDAASDFYLSCYQSSRSSVPLLCVRALVFLGSAGILMASLILTSQSM 224
+SE L+ F LN Y+S S S L +R L S +++ SL +Q
Sbjct: 700 ESEKSLTLEFFLNPAIYKSVYVSIQPSYYRSAGRLLMRYRTLLASFPVVVISLAAYNQFR 759
Query: 225 TFGYWTIYLTHWGIILITITSGAALAVSLVSL 320
F Y + YL+ + + I G + LVS+
Sbjct: 760 YFHYGSAYLSMSAALEVMIRKGLIKLLFLVSI 791
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 29.5 bits (63), Expect = 0.40
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 252 LNILSSTRKSYFGLLILMTPLKYQLI 175
L++ S R+SYFG L+L+ L Y ++
Sbjct: 253 LSLAQSARQSYFGFLLLIVSLGYSIV 278
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 27.5 bits (58), Expect = 1.6
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Frame = +3
Query: 171 LGSAGILMASLILTSQSMTFGY----WTIYLTHWGIILITI----TSGA-ALAVSLVSLK 323
LG G ++ASL+ + GY W WG IL T+ T G A + V L
Sbjct: 492 LGKCGAILASLLFNFLTSIIGYGNVMWIFCGCMWGGILFTLLLPETKGRDADEIDRVELF 551
Query: 324 TGCIGKIFC 350
G GK+ C
Sbjct: 552 YGGDGKVEC 560
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 25.8 bits (54), Expect = 4.9
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Frame = +3
Query: 171 LGSAGILMASLILTSQSMTFGY----WTIYLTHWGIILITI----TSGA-ALAVSLVSLK 323
LG G ++ASL+ + GY W WG IL T+ T G A + + L
Sbjct: 491 LGKCGAILASLLFNFLTGVIGYGNVMWIFCGCMWGGILFTLLLPETKGRDADEIDRLELF 550
Query: 324 TGCIGKIFC 350
G GK+ C
Sbjct: 551 YGKDGKVQC 559
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 4.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 234 YWTIYLTHWGIILITITSGA 293
YW++YLT G++ T++S +
Sbjct: 112 YWSVYLTGNGVLQTTVSSSS 131
>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 156 RALVFLGSA----GILMASLILTSQSMTFGYWTIYLTHWGIILITITSGAALAVSL 311
R LV LG+ GIL +LI S FG IYL + + + + AL+V+L
Sbjct: 77 RTLVTLGATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFAL-LQIPIALSVNL 131
>SPAC1296.05c |||cyclin L family cyclin|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 25.4 bits (53), Expect = 6.5
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 21 DMGRVKKYFKSEFQLSNFNLNHDAASDFYLSCYQSSR---SSVPLLCVRALVF 170
D+ V Y K F+ +NF A D Y SSR S++ L +RAL F
Sbjct: 93 DICNVVVYLKERFKDTNFEARGFIAHDLYSEEMYSSRNRLSNMELEVLRALNF 145
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 102 FYLSCYQSSRSSVPLLCVRALVFLGSAGILMASLILTSQSMTFGYWTIYLTHWGIILI 275
F L+ YQ+S + F + +A +I + F Y T YLT IIL+
Sbjct: 295 FLLNAYQASVPIYTSMLYNYSSFQAGNFLSLAGIINVPLLLIFSYLTRYLTDRDIILL 352
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = +3
Query: 171 LGSAGILMASLILTSQSMTFGY----WTIYLTHWGIILITI 281
LG G ++ASL+ + GY W WG I T+
Sbjct: 480 LGKCGAILASLLFNFLTSVIGYGNVMWIFCGCMWGAIFFTL 520
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 180 AGILMASLILTSQSMTFGYWTIYLTHWGIILIT 278
AG++ +L T Q + Y YL HW L++
Sbjct: 92 AGLVPLALEKTLQDLNLEYIDAYLIHWPFALLS 124
>SPBPB2B2.16c |||MFS family membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 156 RALVFLGSA----GILMASLILTSQSMTFGYWTIYLTHWGIILITITSGAALAVSL 311
R LV LG+ GIL +LI S FG IYL + + + + AL+V+L
Sbjct: 77 RTLVTLGATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFAL-LQIPIALSVNL 131
>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 156 RALVFLGSA----GILMASLILTSQSMTFGYWTIYLTHWGIILITITSGAALAVSL 311
R LV LG+ GIL +LI S FG IYL + + + + AL+V+L
Sbjct: 77 RTLVTLGATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFAL-LQIPIALSVNL 131
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 111 SCYQSSRSSVPLLCVRALVFLGSAGILMASLILTSQSMTFGYWTIY 248
+C +R++V + L+ ++ SLI S S+T+G++ Y
Sbjct: 261 TCQGLTRNNVSISFPSKLILKNKHHYILRSLITHSGSVTYGHYLCY 306
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 176 ISWYFNGVIN---INKPKYDFRVLDNIFNSLGNYSNYNHVGSGPR 301
I W + ++ IN+ +FR NI N++ ++S +H+G GP+
Sbjct: 275 IEWMGDNIVRDFGINENLLEFR---NI-NTITDFSQISHIGPGPK 315
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 33 VKKYFKSEFQLSNFNLNHDAASDFYLSCYQSSRSSVPLLCVRALVFLGSAGIL 191
V+ YFK L NF NHD F +++ ++ L + AL+F+ I+
Sbjct: 290 VRHYFKDVTVLCNFLENHDFPRFF----HETKDIALALNALTALIFMDGIPII 338
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,288,783
Number of Sequences: 5004
Number of extensions: 43214
Number of successful extensions: 130
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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