Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13p13f
(606 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 25 0.58
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.3
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 9.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.4
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 25.0 bits (52), Expect = 0.58
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 18 FDMGRVKKYFKSEFQLSNFNLNH 86
F + KKYF+ NFNLN+
Sbjct: 40 FSNNKSKKYFEQTLNELNFNLNY 62
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 197 VININKPKYDFRVLDNIFNSLGNYSNYNH 283
+I+ Y + +N N+ NY+NYN+
Sbjct: 314 IISSLSNNYKYSNYNNYNNNYNNYNNYNN 342
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 67 AILI*TTMLHRTFICLVTRVAVQVCHCC 150
AI+ +T F+C +CHCC
Sbjct: 723 AIVSASTARSEQFLCRYEAHCFALCHCC 750
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYNH 283
L N +N NY+NYN+
Sbjct: 88 LSNNYNYNNNYNNYNN 103
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 88 LSNNYNYNNNYNNYN 102
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 321 LSNNYNYNNNYNNYN 335
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 236 LDNIFNSLGNYSNYN 280
L N +N NY+NYN
Sbjct: 321 LSNNYNYNNNYNNYN 335
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 36 KKYFKSEFQLSNFNLNHDAASDFYLSCY 119
+K F+ NLNH +FY S Y
Sbjct: 435 RKPFREILYFRCSNLNHMMREEFYQSQY 462
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 275 YNHVGSGPRS 304
YN VGSGP S
Sbjct: 1090 YNQVGSGPLS 1099
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 275 YNHVGSGPRS 304
YN VGSGP S
Sbjct: 1086 YNQVGSGPLS 1095
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,284
Number of Sequences: 438
Number of extensions: 3956
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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