Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13p09f
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 33 0.17
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 33 0.23
Z68106-1|CAA92124.1| 516|Caenorhabditis elegans Hypothetical pr... 31 0.52
AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical ... 31 0.69
Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical pr... 31 0.91
X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein. 31 0.91
X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein. 31 0.91
Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical pr... 29 2.1
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 2.1
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 2.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 2.8
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 29 2.8
Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 29 3.7
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 29 3.7
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 4.9
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 4.9
AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical ... 28 4.9
Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81550-3|CAD44141.1| 548|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81550-2|CAB04478.2| 548|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.4
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 28 6.4
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 6.4
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 28 6.4
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 28 6.4
Z81546-6|CAB04457.1| 425|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 27 8.5
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 27 8.5
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL033514-20|CAA22086.1| 169|Caenorhabditis elegans Hypothetical... 27 8.5
AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical ... 27 8.5
AF016416-5|AAB65277.1| 217|Caenorhabditis elegans Hypothetical ... 27 8.5
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 206 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 316
NG NN Y N N Q N N N+ N+NYN N
Sbjct: 60 NGYNNNY----NNNNNQQQQFYNNNNNNYNNNNYNNN 92
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 381 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 518
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 381 SAPPCWPSPTATLLLWTGVVLPTVYTTLPS-MEFPVSDSSLATFWSG 518
+A P P PT LLW G + V++ L + ++FPV D F +G
Sbjct: 370 TAAPTVPPPTTKRLLWHGTRVTNVFSILMNGLQFPVGDRCGLMFGNG 416
>Z68106-1|CAA92124.1| 516|Caenorhabditis elegans Hypothetical
protein F41E7.1 protein.
Length = 516
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = -2
Query: 358 SVAVPAVDNNKERQVSIVVRVPDRVDIAIC--NNLMVVLV 245
+V VPA+ N KE+Q+ + R+P+ + +AIC +NL V++
Sbjct: 194 AVTVPAMINFKEKQLGSLKRIPENI-LAICCVDNLFCVIL 232
>AF025471-1|AAB71058.1| 379|Caenorhabditis elegans Hypothetical
protein R52.3 protein.
Length = 379
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 379 DPPRLAGRLRLQRY--CCGLAWSCQRSIQHCRQWSSQC 486
D +A ++R+ +Y C G+ CQ+ I R+WS +C
Sbjct: 114 DHYNIAWKIRILKYEECLGIYLDCQKEIYEGRKWSIKC 151
>Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical
protein C46F11.1b protein.
Length = 700
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical
protein C46F11.1a protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein.
Length = 700
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 311 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 475
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical
protein T09F5.2 protein.
Length = 182
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 591 PTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLY 454
P++ +P + T +LPP + T + R+ P+ TP +LY
Sbjct: 101 PSSISPAPDKTEPTSSELPPTITKELTAAISRSEPSTSTPAPTILY 146
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = -2
Query: 598 SVTDNVRAQAEANQVDSTPIAASV-VDEPDQ--KVAKELSDTGNSIDGSVV*TVGKTTPV 428
S+ D R E +++D ++ V +P++ ++ E+S + +DG TVG T +
Sbjct: 1018 SIEDQERETRENDKIDDGEELFNIGVWDPEEAVRIGVEISSRDDRMDGEDQDTVGLTQGL 1077
Query: 427 HNNNVAVGDGQ 395
H+ N++ D +
Sbjct: 1078 HDGNISDEDDE 1088
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = -3
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPT-LGTPLTAVLYRPLAR 439
PP TT AP KP T P PP + T K+ PT P + P+
Sbjct: 208 PPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVPS 267
Query: 438 ---PRQSTTITLQSETASKA 388
P +TT+T + T A
Sbjct: 268 PPPPPANTTVTEEKTTVPPA 287
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 621 GLPPACRPALPTTCAPKLKPIKWTRPQLPPPL 526
G PP PA P P + P T+P +PPP+
Sbjct: 116 GRPPQFYPAQPGPAVPAVIPPVVTQPIVPPPV 147
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSN----YNGNLPLFVIVHGWNSNGNS 364
SRN N W +N NN+ N +N N N YNGN WNS NS
Sbjct: 151 SRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGN---GNNQDNWNSGSNS 206
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSN----YNGNLPLFVIVHGWNSNGNS 364
SRN N W +N NN+ N +N N N YNGN WNS NS
Sbjct: 151 SRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGN---GNNQDNWNSGSNS 206
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = -3
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARP 436
PP C P P CAP P+ P PPP+ Q P CP P + P P
Sbjct: 27 PPPCPPPPPPMCAP--PPL----PCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Query: 435 RQS 427
S
Sbjct: 81 MPS 83
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 29.1 bits (62), Expect = 2.8
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Frame = +2
Query: 278 NVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPAL---LAVSDCNVIVVDWRGLAN 448
NV + + N N NL + V++ G N N + + L V+ + +R A
Sbjct: 121 NVYTPQAGNTNANLSVLVLIDGSNGFSNGGCDQNQEKGIISNLVQRQIVVVTMQYRIGAL 180
Query: 449 GLYNTAVNGVPSVGQFLGNF--LVWL---INNGGGNWGRVHLIGFSLGAHVV 589
G + T N V S L + W+ I N GGN ++ + G GA V
Sbjct: 181 GFFTTYTNSVQSNLGMLDQVQAMRWIKTEIVNFGGNPNQITVAGQDDGACAV 232
>Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical
protein C35A5.10 protein.
Length = 286
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 272 NGNVNSIRNSNYNGNL-PLFVIVHGWNSNGNSAVNTMI 382
N N N N+NYNGN P G+N+ G VN +
Sbjct: 121 NNNYNPYINNNYNGNYNPYGTSNGGYNAYGTIPVNVNV 158
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/44 (25%), Positives = 28/44 (63%)
Frame = -2
Query: 625 VGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKE 494
+GS+ +S+S+ +++ Q+E+N+ D+T I+ S + ++ +
Sbjct: 380 LGSSYPVSNSIKNDITKQSESNRADATNISFSSFESTKSDISPQ 423
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 259 SSYY-KWQCQLYPELELQWKPASLCYCPRLEQQ 354
S YY KWQ +PE E W+P C R+ Q+
Sbjct: 52 SEYYIKWQG--FPESECSWEPIENLQCDRMIQE 82
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 259 SSYY-KWQCQLYPELELQWKPASLCYCPRLEQQ 354
S YY KWQ +PE E W+P C R+ Q+
Sbjct: 52 SEYYIKWQG--FPESECSWEPIENLQCDRMIQE 82
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 615 PPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLT 466
PP P PTT PK++P + P+ PP + P+ P P T
Sbjct: 377 PPKTEP--PTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPPT 424
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 350 SNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSV 487
S+GNS+VN M + + S V+ +D G Y A NG+ V
Sbjct: 289 SDGNSSVNLMSNTNIESDSGLGVVHIDGAGQGTDNYVVASNGLKFV 334
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 592 TDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNN 416
TDN + E+N + ++ I S ++ KV+K++ +GN ++ + K NNN
Sbjct: 671 TDNTTSNTESN-IKTSSIKESNIETSSLKVSKKIEGSGNKMNKKSKKSDDKKISKANNN 728
>AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical
protein C27A12.6 protein.
Length = 491
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +1
Query: 247 PKQPSSYYKWQCQLYPELELQWKPASLCYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYC- 423
P S Y K Y E+ L +CP ++ + ++ H +P RL +C
Sbjct: 188 PTMVSKYRKLMVASYVEIN-----CLLRWCPGIDCGKAVKVSHWEP-RLVVCSCGTCFCF 241
Query: 424 -CGLAWSCQRSIQHCRQWSSQCR 489
CG W + +H ++W +C+
Sbjct: 242 SCGQNWHEPLNCRHLKKWIKKCQ 264
>Z83111-4|CAB05535.2| 498|Caenorhabditis elegans Hypothetical
protein F57G8.5 protein.
Length = 498
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -2
Query: 358 SVAVPAVDNNKERQVSIVVRVPDRVDIAIC--NNLMVVLV 245
+V VPA+ + KER + R+P+ V +A+C +NL V+V
Sbjct: 185 AVTVPAMISFKERGLGSSKRIPENV-LAVCCVDNLFCVIV 223
>Z81550-3|CAD44141.1| 548|Caenorhabditis elegans Hypothetical
protein F55F3.2b protein.
Length = 548
Score = 27.9 bits (59), Expect = 6.4
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +2
Query: 278 NVNSIRNSNYNGNLPLFVIVHGWN-SNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGL 454
NV + N LP++V +HG G + I P L+ ++ +++R G
Sbjct: 99 NVYTPNNVTQASKLPVYVYIHGGGFVEGGGNMGAGIYPNLVNKGPIVMVSINYRLGPFGF 158
Query: 455 YNTAVNGVP---SVGQFLG--NFLVWLINNGGGNWGRVHLIGFSLGAHVV 589
++T P ++ ++ N++ I+ GG+ RV + G S GA V
Sbjct: 159 FSTRQMTAPGNWAISDWIEALNWVQRYISFFGGDPNRVTIGGQSSGAEAV 208
>Z81550-2|CAB04478.2| 548|Caenorhabditis elegans Hypothetical
protein F55F3.2a protein.
Length = 548
Score = 27.9 bits (59), Expect = 6.4
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +2
Query: 278 NVNSIRNSNYNGNLPLFVIVHGWN-SNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGL 454
NV + N LP++V +HG G + I P L+ ++ +++R G
Sbjct: 99 NVYTPNNVTQASKLPVYVYIHGGGFVEGGGNMGAGIYPNLVNKGPIVMVSINYRLGPFGF 158
Query: 455 YNTAVNGVP---SVGQFLG--NFLVWLINNGGGNWGRVHLIGFSLGAHVV 589
++T P ++ ++ N++ I+ GG+ RV + G S GA V
Sbjct: 159 FSTRQMTAPGNWAISDWIEALNWVQRYISFFGGDPNRVTIGGQSSGAEAV 208
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.9 bits (59), Expect = 6.4
Identities = 31/146 (21%), Positives = 48/146 (32%)
Frame = +3
Query: 189 TSLCQGTVQTTNTGFSPDVTKTTIKLLQMAMSTLSGTRTTMETCXXXXXXXXXXXXXXPL 368
T+ T TT T +P T T +T T TT T
Sbjct: 127 TTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 186
Query: 369 *TP*SAPPCWPSPTATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGV 548
TP + P+ T T T PT TT+P+ ++ T + ++TT
Sbjct: 187 TTPTTTTTA-PTTTTTTPTTT-TTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTT 244
Query: 549 EST*LASAWARTLSVTLDDRLVADPT 626
+ ++ T + T + PT
Sbjct: 245 TTPATTTSETTTTTPTTTTQTTTKPT 270
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = -3
Query: 612 PACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPR 433
P +P T P L P++ LPP Q + P + TP+ + ++ RP
Sbjct: 338 PTSQPVQVMTPPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQ-TTRPP 396
Query: 432 QSTTITLQSET 400
T T + T
Sbjct: 397 MPTYATTPATT 407
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = -3
Query: 612 PACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPR 433
P +P T P L P++ LPP Q + P + TP+ + ++ RP
Sbjct: 435 PTSQPVQVMTPPPTLPPVQVPIQTLPPQTRPPQLPPVQITQPPIQTPVQPIFFQ-TTRPP 493
Query: 432 QSTTITLQSET 400
T T + T
Sbjct: 494 MPTYATTPATT 504
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 329 VIVHGWNSNGNSAVNTMIR-PALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 481
V+VHGW+ G A+ + + P + + V DWR L + Y G P
Sbjct: 774 VVVHGWSYGGYMALQMIAKHPNIYRAAIAGGAVSDWR-LYDTAYTERYMGYP 824
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 329 VIVHGWNSNGNSAVNTMIR-PALLAVSDCNVIVVDWRGLANGLYNTAVNGVP 481
V+VHGW+ G A+ + + P + + V DWR L + Y G P
Sbjct: 778 VVVHGWSYGGYMALQMIAKHPNIYRAAIAGGAVSDWR-LYDTAYTERYMGYP 828
>Z81546-6|CAB04457.1| 425|Caenorhabditis elegans Hypothetical
protein F53A2.9 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = +2
Query: 221 QYWLFTRRNQNNHQVITN---GNVNSIRNSNYNGNLPLF----VIVHGWNS 352
+YWL + + N G NSI+ SNY G +P +I+HG N+
Sbjct: 154 EYWLRNFQIDTLRIKVENLIPGKENSIQQSNYTGEIPPLKLKKLIIHGANN 204
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 27.5 bits (58), Expect = 8.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 49 SIVFWQCYPHDPWRQQSLCGRC 114
S W C+P+ W+++ LC C
Sbjct: 265 SKALWPCFPYSSWKEK-LCSEC 285
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 27.5 bits (58), Expect = 8.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 49 SIVFWQCYPHDPWRQQSLCGRC 114
S W C+P+ W+++ LC C
Sbjct: 227 SKALWPCFPYSSWKEK-LCSEC 247
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
protein F40F12.5 protein.
Length = 1144
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +2
Query: 242 RNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSD 409
+++ N + T+ N ++ N N N+P+ ++ G+ ++ + + L+ VSD
Sbjct: 44 QSEKNSNLYTSENTSNSNRLNLNQNIPVGTLIDGFELINEASGSGFLDDQLVDVSD 99
>AL033514-20|CAA22086.1| 169|Caenorhabditis elegans Hypothetical
protein Y75B8A.20 protein.
Length = 169
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -3
Query: 606 CRPALPTTCAPKLKPIKWTRPQLPP---PLLMSQTKKLPRN-CPT 484
C+P P C P P+ +T QLPP P++ +LP+ CPT
Sbjct: 28 CQP--PPICLPPPPPMCFTEIQLPPIRIPIIPLPRIELPQPCCPT 70
>AF025470-4|AAB71054.1| 403|Caenorhabditis elegans Hypothetical
protein W10D9.4 protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 104 VEGVSRYVW-MPDGEGVPHLVDLEEP 178
V G +++V MPDG +PH + EEP
Sbjct: 303 VSGPNQFVMNMPDGRAIPHGMGQEEP 328
>AF016416-5|AAB65277.1| 217|Caenorhabditis elegans Hypothetical
protein F29A7.7 protein.
Length = 217
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 484 CRTVPWQLFGLAHQQRRRQLGSSPLDWL 567
C W++ G+A ++ +++GS+ L WL
Sbjct: 123 CEKFGWKVTGIATEEEVKKIGSNSLFWL 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,958,378
Number of Sequences: 27780
Number of extensions: 375798
Number of successful extensions: 1561
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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