BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13p03f
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D82060-1|BAA11528.1| 429|Homo sapiens membrane protein with his... 58 2e-08
BC000645-1|AAH00645.1| 469|Homo sapiens solute carrier family 3... 58 2e-08
AL844527-11|CAI41839.1| 469|Homo sapiens solute carrier family ... 58 2e-08
AL844527-10|CAM25786.1| 220|Homo sapiens solute carrier family ... 58 2e-08
AL662824-23|CAI17615.1| 469|Homo sapiens solute carrier family ... 58 2e-08
AL662824-22|CAM24944.1| 220|Homo sapiens solute carrier family ... 58 2e-08
AL645940-9|CAI18067.1| 469|Homo sapiens solute carrier family 3... 58 2e-08
AL645940-8|CAM25432.1| 220|Homo sapiens solute carrier family 3... 58 2e-08
AL031228-11|CAA20238.1| 469|Homo sapiens solute carrier family ... 58 2e-08
AF117221-1|AAD12305.1| 429|Homo sapiens KE4 protein protein. 58 2e-08
U41060-1|AAA96258.2| 749|Homo sapiens estrogen regulated LIV-1 ... 38 0.021
BC039498-1|AAH39498.1| 433|Homo sapiens SLC39A6 protein protein. 38 0.021
BC019016-1|AAH19016.1| 364|Homo sapiens solute carrier family 3... 38 0.021
BC008853-1|AAH08853.2| 371|Homo sapiens SLC39A13 protein protein. 38 0.021
AK098651-1|BAC05365.1| 325|Homo sapiens protein ( Homo sapiens ... 38 0.021
BC027884-1|AAH27884.1| 539|Homo sapiens solute carrier family 3... 36 0.083
AK172768-1|BAD18751.1| 540|Homo sapiens protein ( Homo sapiens ... 36 0.083
BC112223-1|AAI12224.1| 831|Homo sapiens solute carrier family 3... 34 0.44
BC101516-1|AAI01517.1| 831|Homo sapiens solute carrier family 3... 34 0.44
AB033091-1|BAA86579.1| 835|Homo sapiens KIAA1265 protein protein. 34 0.44
BC117323-1|AAI17324.1| 691|Homo sapiens SLC39A12 protein protein. 31 2.4
BC094700-1|AAH94700.1| 691|Homo sapiens SLC39A12 protein protein. 31 2.4
BC065917-1|AAH65917.1| 524|Homo sapiens SLC39A12 protein protein. 31 2.4
BC035118-1|AAH35118.1| 309|Homo sapiens SLC39A12 protein protein. 31 2.4
AL590111-2|CAI15903.1| 654|Homo sapiens solute carrier family 3... 31 2.4
AL590111-1|CAI15904.1| 690|Homo sapiens solute carrier family 3... 31 2.4
AL360231-2|CAH70124.1| 654|Homo sapiens solute carrier family 3... 31 2.4
AL360231-1|CAH70123.1| 690|Homo sapiens solute carrier family 3... 31 2.4
AK055061-1|BAB70848.1| 654|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC062625-1|AAH62625.1| 647|Homo sapiens solute carrier family 3... 30 5.4
AK025537-1|BAB15164.1| 647|Homo sapiens protein ( Homo sapiens ... 30 5.4
AK000334-1|BAA91091.1| 626|Homo sapiens protein ( Homo sapiens ... 30 5.4
AB126942-1|BAD02485.1| 622|Homo sapiens hypothetical protein pr... 29 9.5
>D82060-1|BAA11528.1| 429|Homo sapiens membrane protein with
histidine rich charge clusters protein.
Length = 429
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 168 LLQILLSFASGGLLGDAFLHLIPHALEPHS 197
>BC000645-1|AAH00645.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 168 LLQILLSFASGGLLGDAFLHLIPHALEPHS 197
>AL844527-11|CAI41839.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 168 LLQILLSFASGGLLGDAFLHLIPHALEPHS 197
>AL844527-10|CAM25786.1| 220|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 220
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 78 LLQILLSFASGGLLGDAFLHLIPHALEPHS 107
>AL662824-23|CAI17615.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 168 LLQILLSFASGGLLGDAFLHLIPHALEPHS 197
>AL662824-22|CAM24944.1| 220|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 220
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 78 LLQILLSFASGGLLGDAFLHLIPHALEPHS 107
>AL645940-9|CAI18067.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 168 LLQILLSFASGGLLGDAFLHLIPHALEPHS 197
>AL645940-8|CAM25432.1| 220|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 220
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 78 LLQILLSFASGGLLGDAFLHLIPHALEPHS 107
>AL031228-11|CAA20238.1| 469|Homo sapiens solute carrier family 39
(zinc transporter), member 7 protein.
Length = 469
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 168 LLQILLSFASGGLLGDAFLHLIPHALEPHS 197
>AF117221-1|AAD12305.1| 429|Homo sapiens KE4 protein protein.
Length = 429
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL+ILL+FASGGLLGDAFLHLIPHAL PH+
Sbjct: 168 LLQILLSFASGGLLGDAFLHLIPHALEPHS 197
>U41060-1|AAA96258.2| 749|Homo sapiens estrogen regulated LIV-1
protein protein.
Length = 749
Score = 38.3 bits (85), Expect = 0.021
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL L+A A G L GDAFLHL+PH+ H+
Sbjct: 351 LLSFLVALAVGTLSGDAFLHLLPHSHASHH 380
>BC039498-1|AAH39498.1| 433|Homo sapiens SLC39A6 protein protein.
Length = 433
Score = 38.3 bits (85), Expect = 0.021
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL L+A A G L GDAFLHL+PH+ H+
Sbjct: 82 LLSFLVALAVGTLSGDAFLHLLPHSHASHH 111
>BC019016-1|AAH19016.1| 364|Homo sapiens solute carrier family 39
(zinc transporter), member 13 protein.
Length = 364
Score = 38.3 bits (85), Expect = 0.021
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 321 LKILLAFASGGLLGDAFLHLIPHA 392
LK LL+FA GGLLG+ FLHL+P A
Sbjct: 106 LKQLLSFALGGLLGNVFLHLLPEA 129
>BC008853-1|AAH08853.2| 371|Homo sapiens SLC39A13 protein protein.
Length = 371
Score = 38.3 bits (85), Expect = 0.021
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 321 LKILLAFASGGLLGDAFLHLIPHA 392
LK LL+FA GGLLG+ FLHL+P A
Sbjct: 106 LKQLLSFALGGLLGNVFLHLLPEA 129
>AK098651-1|BAC05365.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ25785 fis, clone TST06832. ).
Length = 325
Score = 38.3 bits (85), Expect = 0.021
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 321 LKILLAFASGGLLGDAFLHLIPHA 392
LK LL+FA GGLLG+ FLHL+P A
Sbjct: 106 LKQLLSFALGGLLGNVFLHLLPEA 129
>BC027884-1|AAH27884.1| 539|Homo sapiens solute carrier family 39
(metal ion transporter), member 5 protein.
Length = 539
Score = 36.3 bits (80), Expect = 0.083
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 312 QPLLKILLAFASGGLLGDAFLHLIPHA 392
+PLL L A A G L GDA LHL+PHA
Sbjct: 242 RPLLGFLGALAVGTLCGDALLHLLPHA 268
>AK172768-1|BAD18751.1| 540|Homo sapiens protein ( Homo sapiens
cDNA FLJ23929 fis, clone COL05747. ).
Length = 540
Score = 36.3 bits (80), Expect = 0.083
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +3
Query: 312 QPLLKILLAFASGGLLGDAFLHLIPHA 392
+PLL L A A G L GDA LHL+PHA
Sbjct: 243 RPLLGFLGALAVGTLCGDALLHLLPHA 269
>BC112223-1|AAI12224.1| 831|Homo sapiens solute carrier family 39
(zinc transporter), member 10 protein.
Length = 831
Score = 33.9 bits (74), Expect = 0.44
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL L+A A G + GDA LHL+PH+ H+
Sbjct: 439 LLTFLVALAVGTMSGDALLHLLPHSQGGHD 468
>BC101516-1|AAI01517.1| 831|Homo sapiens solute carrier family 39
(zinc transporter), member 10 protein.
Length = 831
Score = 33.9 bits (74), Expect = 0.44
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL L+A A G + GDA LHL+PH+ H+
Sbjct: 439 LLTFLVALAVGTMSGDALLHLLPHSQGGHD 468
>AB033091-1|BAA86579.1| 835|Homo sapiens KIAA1265 protein protein.
Length = 835
Score = 33.9 bits (74), Expect = 0.44
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHN 407
LL L+A A G + GDA LHL+PH+ H+
Sbjct: 443 LLTFLVALAVGTMSGDALLHLLPHSQGGHD 472
>BC117323-1|AAI17324.1| 691|Homo sapiens SLC39A12 protein protein.
Length = 691
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>BC094700-1|AAH94700.1| 691|Homo sapiens SLC39A12 protein protein.
Length = 691
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>BC065917-1|AAH65917.1| 524|Homo sapiens SLC39A12 protein protein.
Length = 524
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>BC035118-1|AAH35118.1| 309|Homo sapiens SLC39A12 protein protein.
Length = 309
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 19 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 50
>AL590111-2|CAI15903.1| 654|Homo sapiens solute carrier family 39
(zinc transporter), member 12 protein.
Length = 654
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>AL590111-1|CAI15904.1| 690|Homo sapiens solute carrier family 39
(zinc transporter), member 12 protein.
Length = 690
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>AL360231-2|CAH70124.1| 654|Homo sapiens solute carrier family 39
(zinc transporter), member 12 protein.
Length = 654
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>AL360231-1|CAH70123.1| 690|Homo sapiens solute carrier family 39
(zinc transporter), member 12 protein.
Length = 690
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>AK055061-1|BAB70848.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ30499 fis, clone BRAWH2000443, weakly similar to
Human breast cancer, estrogen regulated LIV-1 protein
(LIV-1) ).
Length = 654
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDK 413
+L++ + A G L GDA LHLIP L H +
Sbjct: 400 ILQLFVGLAVGTLSGDALLHLIPQVLGLHKQE 431
>BC062625-1|AAH62625.1| 647|Homo sapiens solute carrier family 39
(zinc transporter), member 4 protein.
Length = 647
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDKQ 416
+L+ L+ A G L GDA LHL P L H +
Sbjct: 360 ILQTFLSLAVGALTGDAVLHLTPKVLGLHTHSE 392
>AK025537-1|BAB15164.1| 647|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21884 fis, clone HEP02863. ).
Length = 647
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDKQ 416
+L+ L+ A G L GDA LHL P L H +
Sbjct: 360 ILQTFLSLAVGALTGDAVLHLTPKVLGLHTHSE 392
>AK000334-1|BAA91091.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ20327 fis, clone HEP10012. ).
Length = 626
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHALMPHNDKQ 416
+L+ L+ A G L GDA LHL P L H +
Sbjct: 335 ILQTFLSLAVGALTGDAVLHLTPKVLGLHTHSE 367
>AB126942-1|BAD02485.1| 622|Homo sapiens hypothetical protein
protein.
Length = 622
Score = 29.5 bits (63), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 318 LLKILLAFASGGLLGDAFLHLIPHA 392
L+ +L A G LLG A HLIP A
Sbjct: 266 LITVLQGLAVGSLLGSALFHLIPQA 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,261,684
Number of Sequences: 237096
Number of extensions: 1916670
Number of successful extensions: 3910
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3910
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -