Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13o22r
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.4  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   8.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 497 YRRFPWTLLSCSLVIVLNVLVYFDSHSACPFSFFFYSLVQFLHL 628
           Y R    L S +L  +L+     + H++ PFS   YS ++ L+L
Sbjct: 446 YERDTCLLASDALKQILSAAYNVELHNSSPFS--IYSFLERLNL 487


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 497 YRRFPWTLLSCSLVIVLNVLVYFDSHSACPFSFFFYSLVQFLHL 628
           Y R    L S +L  +L+     + H++ PFS   YS ++ L+L
Sbjct: 484 YERDTCLLASDALKQILSAAYNVELHNSSPFS--IYSFLERLNL 525


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 111 DEETNLQQREEKSNVPQKNWW*KK 40
           D E+N+   ++K+ V +  WW K+
Sbjct: 64  DMESNMDMYKDKNVVQKFLWWYKQ 87


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 111 DEETNLQQREEKSNVPQKNWW*KK 40
           D E+N+   ++K+ V +  WW K+
Sbjct: 64  DMESNMDMYKDKNVVQKFLWWYKQ 87


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 245 TEAKAVWKENLFFTKQDQ 192
           T+A  VW  +LFF+ + +
Sbjct: 110 TDASRVWMPDLFFSNEKE 127


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 245 TEAKAVWKENLFFTKQDQ 192
           T+A  VW  +LFF+ + +
Sbjct: 110 TDASRVWMPDLFFSNEKE 127


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 152 DTEGQKDRRELKSLMKRRIYNKERKNQMFHKKI 54
           + E  K+ + + SL  + I+N    N   +KK+
Sbjct: 294 ERERSKEPKIISSLSNKTIHNNNNYNNYNNKKL 326


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 250 CPQKLKLFGKKIYSSQSKI 194
           CP  L+L  ++ Y  +SK+
Sbjct: 312 CPPNLRLTSERGYEQESKV 330


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 250 CPQKLKLFGKKIYSSQSKI 194
           CP  L+L  ++ Y  +SK+
Sbjct: 402 CPPNLRLTSERGYEQESKV 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,828
Number of Sequences: 438
Number of extensions: 2436
Number of successful extensions: 35
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)