Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13n22f
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98172-1|CAI19895.1| 293|Homo sapiens nuclear undecaprenyl pyro... 44 5e-04
BC110325-1|AAI10326.1| 293|Homo sapiens nuclear undecaprenyl py... 44 5e-04
BC066910-1|AAH66910.1| 293|Homo sapiens nuclear undecaprenyl py... 44 5e-04
BC063794-1|AAH63794.1| 293|Homo sapiens nuclear undecaprenyl py... 44 5e-04
BC013026-1|AAH13026.1| 293|Homo sapiens nuclear undecaprenyl py... 44 5e-04
AL590303-1|CAH71370.1| 293|Homo sapiens nuclear undecaprenyl py... 44 5e-04
>Z98172-1|CAI19895.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S.\n\ protein.
Length = 293
Score = 43.6 bits (98), Expect = 5e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +1
Query: 289 LSKQPKH--LVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVE 462
L K P H LV+ S D+A +V+W + GI ++S YD G +L + +
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 463 KNKKGVPG--CIKWSKK-PDLNGYTNGIPAHKIVVNIFSCQNGRS 588
K ++ + G C K+S + + N + + + V + S ++G++
Sbjct: 154 KQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKA 198
>BC110325-1|AAI10326.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 43.6 bits (98), Expect = 5e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +1
Query: 289 LSKQPKH--LVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVE 462
L K P H LV+ S D+A +V+W + GI ++S YD G +L + +
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 463 KNKKGVPG--CIKWSKK-PDLNGYTNGIPAHKIVVNIFSCQNGRS 588
K ++ + G C K+S + + N + + + V + S ++G++
Sbjct: 154 KQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKA 198
>BC066910-1|AAH66910.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 43.6 bits (98), Expect = 5e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +1
Query: 289 LSKQPKH--LVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVE 462
L K P H LV+ S D+A +V+W + GI ++S YD G +L + +
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 463 KNKKGVPG--CIKWSKK-PDLNGYTNGIPAHKIVVNIFSCQNGRS 588
K ++ + G C K+S + + N + + + V + S ++G++
Sbjct: 154 KQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKA 198
>BC063794-1|AAH63794.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 43.6 bits (98), Expect = 5e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +1
Query: 289 LSKQPKH--LVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVE 462
L K P H LV+ S D+A +V+W + GI ++S YD G +L + +
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 463 KNKKGVPG--CIKWSKK-PDLNGYTNGIPAHKIVVNIFSCQNGRS 588
K ++ + G C K+S + + N + + + V + S ++G++
Sbjct: 154 KQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKA 198
>BC013026-1|AAH13026.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S. cerevisiae)
protein.
Length = 293
Score = 43.6 bits (98), Expect = 5e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +1
Query: 289 LSKQPKH--LVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVE 462
L K P H LV+ S D+A +V+W + GI ++S YD G +L + +
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 463 KNKKGVPG--CIKWSKK-PDLNGYTNGIPAHKIVVNIFSCQNGRS 588
K ++ + G C K+S + + N + + + V + S ++G++
Sbjct: 154 KQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKA 198
>AL590303-1|CAH71370.1| 293|Homo sapiens nuclear undecaprenyl
pyrophosphate synthase 1 homolog (S.\n\ protein.
Length = 293
Score = 43.6 bits (98), Expect = 5e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +1
Query: 289 LSKQPKH--LVVLSDSDYHSIDDLARMVIWSLVAGIPFLSFYDVSGQLSYQEEKLFNAVE 462
L K P H LV+ S D+A +V+W + GI ++S YD G +L + +
Sbjct: 94 LEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEIL 153
Query: 463 KNKKGVPG--CIKWSKK-PDLNGYTNGIPAHKIVVNIFSCQNGRS 588
K ++ + G C K+S + + N + + + V + S ++G++
Sbjct: 154 KQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKA 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,642,948
Number of Sequences: 237096
Number of extensions: 1372594
Number of successful extensions: 2516
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2516
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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