Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13n14f
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.78 
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   3.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 13/61 (21%), Positives = 27/61 (44%)
 Frame = +2

Query: 392 DDEIRLVNKLTEAHVIKEKIPKMKVKFAAQIFSQRVSSAMRFLAKHKILPEECSQTADFL 571
           + +IR+VNK     +      ++  ++  +    R+    RF+  H+ +PE      D L
Sbjct: 219 EGDIRIVNKDRRGELFYYMHQQIMARYNCERLCNRLGRVKRFINWHEPIPEAYFPKLDSL 278

Query: 572 L 574
           +
Sbjct: 279 V 279


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 172 PLRSKMKCYFGCL 210
           P   K+KCYF C+
Sbjct: 63  PEDEKLKCYFNCV 75


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 205 CLDNGLNYAAHIEIDQPQLLSG 270
           C  NG  YA H E+ +    SG
Sbjct: 118 CASNGKIYANHCELHRAACHSG 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,494
Number of Sequences: 438
Number of extensions: 2711
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)