Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV13m12f
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 61 6e-10
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 61 6e-10
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 37 0.014
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 37 0.014
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 32 0.41
CU457741-12|CAM36353.1| 157|Caenorhabditis elegans Hypothetical... 32 0.41
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 32 0.41
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 32 0.41
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 32 0.41
Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024877-13|AAF60901.2| 710|Caenorhabditis elegans Nematode ast... 29 2.9
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 29 3.8
AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine re... 28 5.1
AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine re... 28 5.1
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL117204-25|CAB55139.2| 528|Caenorhabditis elegans Hypothetical... 27 8.9
AL117204-15|CAB55129.1| 521|Caenorhabditis elegans Hypothetical... 27 8.9
AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical ... 27 8.9
AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical ... 27 8.9
AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical ... 27 8.9
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 61.3 bits (142), Expect = 6e-10
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +2
Query: 215 SIAASTYRLPTTTRPLHYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITS 394
S A RLPT P HYNV + +++ +F G I + A + +HA L I S
Sbjct: 8 SAAVKFERLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEA-TDVLKVHAQSLLIQS 66
Query: 395 V--ILRQGTVTTPSTYTLQKELQFLRLRLNTGTLVFNAASPVIYTLTIDFAARLRTDMYG 568
V I + G + + +L L ++L T P L F L M G
Sbjct: 67 VSLITQPGDASKSLETSYDDKLNILTIKLPT------TMQPQKVQLDFKFVGELNDKMRG 120
Query: 569 IYRTWFRNSTNDVTRWMASTQFQATSARY 655
YR+ +++ N +++ASTQF++T ARY
Sbjct: 121 FYRSQYKDK-NGTEKFLASTQFESTYARY 148
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 61.3 bits (142), Expect = 6e-10
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +2
Query: 215 SIAASTYRLPTTTRPLHYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITS 394
S A RLPT P HYNV + +++ +F G I + A + +HA L I S
Sbjct: 72 SAAVKFERLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEA-TDVLKVHAQSLLIQS 130
Query: 395 V--ILRQGTVTTPSTYTLQKELQFLRLRLNTGTLVFNAASPVIYTLTIDFAARLRTDMYG 568
V I + G + + +L L ++L T P L F L M G
Sbjct: 131 VSLITQPGDASKSLETSYDDKLNILTIKLPT------TMQPQKVQLDFKFVGELNDKMRG 184
Query: 569 IYRTWFRNSTNDVTRWMASTQFQATSARY 655
YR+ +++ N +++ASTQF++T ARY
Sbjct: 185 FYRSQYKDK-NGTEKFLASTQFESTYARY 212
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 58.8 bits (136), Expect = 3e-09
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Frame = +2
Query: 182 EDIEAFENIDRSIAASTYRLPTTTRPLHYNVL---------WAIDISRLTFSGTVEIQLY 334
E++ A + D +I+AS RLPT+ P+ Y + + D + LTF G V I+L
Sbjct: 56 ENVPAAKPED-NISASELRLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELN 114
Query: 335 ATRANVSEIVIHADDLEITSVILRQGTVTTPS---TYTLQ-KELQFLRLRLNTGTLVFNA 502
T++ + ++ +++ DL T +++ ++ +TL K+ ++ N V
Sbjct: 115 ITKS-IKKVSLNSKDLNYTEEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNLDETVEPT 173
Query: 503 ASPVIYTLTIDFAARLRTDMYGIYRTWFRNSTNDVTRWMASTQFQATSAR 652
S TL + F A LRTDM G+Y+T + NS + ++ A TQ + AR
Sbjct: 174 TSA---TLKVAFGAPLRTDMSGLYQTTYTNSKGE-SKMAAVTQMEPVYAR 219
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 58.8 bits (136), Expect = 3e-09
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Frame = +2
Query: 182 EDIEAFENIDRSIAASTYRLPTTTRPLHYNVL---------WAIDISRLTFSGTVEIQLY 334
E++ A + D +I+AS RLPT+ P+ Y + + D + LTF G V I+L
Sbjct: 68 ENVPAAKPED-NISASELRLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELN 126
Query: 335 ATRANVSEIVIHADDLEITSVILRQGTVTTPS---TYTLQ-KELQFLRLRLNTGTLVFNA 502
T++ + ++ +++ DL T +++ ++ +TL K+ ++ N V
Sbjct: 127 ITKS-IKKVSLNSKDLNYTEEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNLDETVEPT 185
Query: 503 ASPVIYTLTIDFAARLRTDMYGIYRTWFRNSTNDVTRWMASTQFQATSAR 652
S TL + F A LRTDM G+Y+T + NS + ++ A TQ + AR
Sbjct: 186 TSA---TLKVAFGAPLRTDMSGLYQTTYTNSKGE-SKMAAVTQMEPVYAR 231
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 57.2 bits (132), Expect = 1e-08
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Frame = +2
Query: 206 IDRSIA-ASTYRLPTTTRPLHYNVL---------WAIDISRLTFSGTVEIQLYATRANVS 355
+D IA ++YRLP P HY++ W D +++TF G V I L +
Sbjct: 20 LDARIADVASYRLPRHVSPSHYDIHIKTYLPGYGWKADENKITFEGNVNI-LLDIKETTD 78
Query: 356 EIVIHADDLEITSVILRQGTVTTP-STYTLQKELQFLRLRLNTGTLVFNAASPVIYTLTI 532
++V+H+ L I S + S + +Q E QFL LN V ++A + I
Sbjct: 79 KLVLHSSSLNIISATFQSDEQNVSISHWNVQTESQFLTFYLNNTVKVQSSAG-----IQI 133
Query: 533 DFAARLRTDMYGIYRTWFRNSTNDVTRWMA--STQFQATSAR 652
+F ++RTD G++ T NST + M +TQF+ AR
Sbjct: 134 NFQGKVRTDGLGLFAT---NSTREDGTVMTNFATQFETIFAR 172
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 55.2 bits (127), Expect = 4e-08
Identities = 50/171 (29%), Positives = 74/171 (43%)
Frame = +2
Query: 143 TIFLDEKLEGEIFEDIEAFENIDRSIAASTYRLPTTTRPLHYNVLWAIDISRLTFSGTVE 322
T F L+ E + + R++ + YRL TT Y W D TF G V+
Sbjct: 11 TFFKTTDLQVVTQETDDTNYRLPRNVFPTEYRLHITTFLPGYK--WEADEKSFTFIGDVK 68
Query: 323 IQLYATRANVSEIVIHADDLEITSVILRQGTVTTPSTYTLQKELQFLRLRLNTGTLVFNA 502
IQ+ + IV+H D L I +V+L V L+ +Q+ RL +
Sbjct: 69 IQI-EVKEETDTIVLHTDSLNINNVLLHNACVCA----NLKNLIQYFRLAITKFENRQQT 123
Query: 503 ASPVIYTLTIDFAARLRTDMYGIYRTWFRNSTNDVTRWMASTQFQATSARY 655
S Y+L ++R D G YRT N+ T + A TQF+ T+AR+
Sbjct: 124 NSK--YSL-YGKIGKIREDGEGYYRT-ISPGLNETTMYNAVTQFEPTAARF 170
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 36.7 bits (81), Expect = 0.014
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Frame = +2
Query: 236 RLPTTTRPLHYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITSV-ILRQG 412
RLP T P+ Y++ +++ +V I++ + + ++++A++LE+ S I ++G
Sbjct: 199 RLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILI-KNDTKLLILNAENLEMKSFDITKKG 257
Query: 413 TVTTPSTYTLQKELQF---LRLRLNTGTLVFNAASPVIYTLTIDFAARLRTDMYGIYRTW 583
Q+ L RL+ G + LTI ++A++++D+ G+Y +
Sbjct: 258 AKVKADFVKCAVMTQWAWKLAKRLHKGDHI---------VLTIYYSAQMKSDLQGLYFST 308
Query: 584 FRNSTNDVTRWMASTQFQATSAR 652
+ T+ A+TQF+ T AR
Sbjct: 309 HLGTDGKKTK-SAATQFEPTFAR 330
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 36.7 bits (81), Expect = 0.014
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Frame = +2
Query: 236 RLPTTTRPLHYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITSV-ILRQG 412
RLP T P+ Y++ +++ +V I++ + + ++++A++LE+ S I ++G
Sbjct: 199 RLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILI-KNDTKLLILNAENLEMKSFDITKKG 257
Query: 413 TVTTPSTYTLQKELQF---LRLRLNTGTLVFNAASPVIYTLTIDFAARLRTDMYGIYRTW 583
Q+ L RL+ G + LTI ++A++++D+ G+Y +
Sbjct: 258 AKVKADFVKCAVMTQWAWKLAKRLHKGDHI---------VLTIYYSAQMKSDLQGLYFST 308
Query: 584 FRNSTNDVTRWMASTQFQATSAR 652
+ T+ A+TQF+ T AR
Sbjct: 309 HLGTDGKKTK-SAATQFEPTFAR 330
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 263 HYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITSVILRQGTVTTPSTYTL 442
HY + W +D + +G V I L + + IV+ DL + SV L + +TL
Sbjct: 22 HYALKWKVDFEKKHIAGDVSITL-DVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 443 Q 445
+
Sbjct: 81 E 81
>CU457741-12|CAM36353.1| 157|Caenorhabditis elegans Hypothetical
protein C42C1.11b protein.
Length = 157
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 263 HYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITSVILRQGTVTTPSTYTL 442
HY + W +D + +G V I L + + IV+ DL + SV L + +TL
Sbjct: 22 HYALKWKVDFEKKHIAGDVSITL-DVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 443 Q 445
+
Sbjct: 81 E 81
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 263 HYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITSVILRQGTVTTPSTYTL 442
HY + W +D + +G V I L + + IV+ DL + SV L + +TL
Sbjct: 22 HYALKWKVDFEKKHIAGDVSITL-DVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 443 Q 445
+
Sbjct: 81 E 81
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 263 HYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITSVILRQGTVTTPSTYTL 442
HY + W +D + +G V I L + + IV+ DL + SV L + +TL
Sbjct: 22 HYALKWKVDFEKKHIAGDVSITL-DVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 443 Q 445
+
Sbjct: 81 E 81
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 263 HYNVLWAIDISRLTFSGTVEIQLYATRANVSEIVIHADDLEITSVILRQGTVTTPSTYTL 442
HY + W +D + +G V I L + + IV+ DL + SV L + +TL
Sbjct: 22 HYALKWKVDFEKKHIAGDVSITL-DVKQDTERIVLDTRDLSVQSVALNLNGEPKKAGFTL 80
Query: 443 Q 445
+
Sbjct: 81 E 81
>Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical
protein T04H1.6 protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = -2
Query: 532 NGQCVNHRRSSIEDESARIKAQSQ-EL*LFLEGVSGGCRDGSLSENHGCDFQVVGMNNYL 356
+G+ N+ S DE A +K++ +GV+ C DGS + GC + ++
Sbjct: 237 DGEDENNCPSCARDEFACVKSEHCIPANKRCDGVADDCEDGSNLDEIGCSKNTTCIGKFV 296
Query: 355 AYVSPSGVQ-LDFNGAREG*PGDINSPKHVVMKRSGGCGQSVCTSGNTSI 209
S GV +D + +G +N + K+ G +C + S+
Sbjct: 297 CGTSRGGVSCVDLDMHCDGKKDCLNGEDEMNCKQEGRQKYLLCENQKQSV 346
>AC024877-13|AAF60901.2| 710|Caenorhabditis elegans Nematode
astacin protease protein30 protein.
Length = 710
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 182 EDIEAFENIDRSIAASTYRLPTTTRPLHYNVLW 280
E IE F NI R+ + Y + TT P N +W
Sbjct: 36 EKIERFRNIARTFSPFVYEVNTTPAPHFDNFIW 68
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 386 ITSVILRQGTVTTPSTYTLQKELQFLRLRLNTGTLVFNAASPVIYTL 526
+ S++ + T P + Q ELQ +R N L+++ + +IYT+
Sbjct: 1066 VASLVTGEFTAIDPEPFVTQMELQAIRFVGNNNVLMWSKSHYMIYTV 1112
>AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform b protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 20 ALVVLSVLKFVKMANYKVIIFLAACVLAQAFPD-EPIYRTNNTIFLDEKLEGEIFEDIEA 196
A+ LS FV + +++FL AC++ P + + I K I + E
Sbjct: 278 AIFNLSFFSFVPVPYAIMLVFLLACIIGMIILSLLPAAKVQDQIVATSK----ILMESED 333
Query: 197 FENIDRSIAASTYRL 241
FEN + TYRL
Sbjct: 334 FENAENQKVYQTYRL 348
>AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform a protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 20 ALVVLSVLKFVKMANYKVIIFLAACVLAQAFPD-EPIYRTNNTIFLDEKLEGEIFEDIEA 196
A+ LS FV + +++FL AC++ P + + I K I + E
Sbjct: 278 AIFNLSFFSFVPVPYAIMLVFLLACIIGMIILSLLPAAKVQDQIVATSK----ILMESED 333
Query: 197 FENIDRSIAASTYRL 241
FEN + TYRL
Sbjct: 334 FENAENQKVYQTYRL 348
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
protein W08D2.5 protein.
Length = 1256
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 152 LDEKLEGEIFEDIEAFENIDRSIAASTYRLPTTTRPLHYNVLWAIDISRLTFSGTVE 322
++E +EG+I E+ + F+N+ SI PT + Y+V I + TFS +++
Sbjct: 557 MEEGIEGDIEEETQRFDNVQPSIIK-----PTDDKSAEYSV-----IRQFTFSSSLQ 603
>AL117204-25|CAB55139.2| 528|Caenorhabditis elegans Hypothetical
protein Y116A8C.38 protein.
Length = 528
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 40 IEICQDGELQGHYLLGGVRVST 105
IE C G LQGH + G R+ T
Sbjct: 266 IEFCNGGNLQGHLIKFGDRIGT 287
>AL117204-15|CAB55129.1| 521|Caenorhabditis elegans Hypothetical
protein Y116A8C.24 protein.
Length = 521
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 40 IEICQDGELQGHYLLGGVRVST 105
IE C G LQGH + G R+ T
Sbjct: 266 IEFCNGGNLQGHLIKFGDRIGT 287
>AF000196-9|AAO61448.1| 395|Caenorhabditis elegans Hypothetical
protein B0041.2c protein.
Length = 395
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 548 SEQRNQWSVCKSQEKQH*RRECPY*GAVSGTVTLSGGCKW 429
SE RN + Q++QH ++ P+ G L GG W
Sbjct: 116 SETRNPFFAQHMQQQQHQQQHQPHYGGYGDNGVLDGGSLW 155
>AF000196-8|AAL11096.1| 624|Caenorhabditis elegans Hypothetical
protein B0041.2b protein.
Length = 624
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 548 SEQRNQWSVCKSQEKQH*RRECPY*GAVSGTVTLSGGCKW 429
SE RN + Q++QH ++ P+ G L GG W
Sbjct: 345 SETRNPFFAQHMQQQQHQQQHQPHYGGYGDNGVLDGGSLW 384
>AF000196-7|AAC24251.2| 706|Caenorhabditis elegans Hypothetical
protein B0041.2a protein.
Length = 706
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 548 SEQRNQWSVCKSQEKQH*RRECPY*GAVSGTVTLSGGCKW 429
SE RN + Q++QH ++ P+ G L GG W
Sbjct: 427 SETRNPFFAQHMQQQQHQQQHQPHYGGYGDNGVLDGGSLW 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,319,583
Number of Sequences: 27780
Number of extensions: 324658
Number of successful extensions: 879
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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