Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13m05f
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069690-1|AAL39835.1|  494|Drosophila melanogaster LD46328p pro...   146   3e-35
AE014297-2874|AAF55812.2|  494|Drosophila melanogaster CG33094-P...   146   3e-35
AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-P...    33   0.42 
BT030302-1|ABN49441.1|  101|Drosophila melanogaster IP18727p pro...    31   1.3  
BT030292-1|ABN49431.1|  101|Drosophila melanogaster IP18627p pro...    31   1.3  
BT030280-1|ABN49419.1|  101|Drosophila melanogaster IP18527p pro...    31   1.3  
BT029723-1|ABL75780.1|  101|Drosophila melanogaster IP17577p pro...    31   1.3  
AE014298-1775|AAF48170.1|  470|Drosophila melanogaster CG2556-PA...    31   1.7  
AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA...    29   5.1  
AY102693-1|AAM27522.1|  433|Drosophila melanogaster LD45181p pro...    29   6.8  
AE014297-1932|AAF55129.1|  433|Drosophila melanogaster CG6912-PA...    29   6.8  
AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase g...    28   9.0  
AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA...    28   9.0  

>AY069690-1|AAL39835.1|  494|Drosophila melanogaster LD46328p
           protein.
          Length = 494

 Score =  146 bits (353), Expect = 3e-35
 Identities = 63/83 (75%), Positives = 73/83 (87%)
 Frame = +3

Query: 378 MSHHSDEHALLTTTSDSFWEPGNYKRTTKRVDDGHRLCSELQTLVQERADIEKAYAKSLR 557
           MSHHSD+  LL   SDSFWEPGNYKRTTKR++DG++LC++LQ L+QERADIEK YAKSLR
Sbjct: 1   MSHHSDDQ-LLQAGSDSFWEPGNYKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLR 59

Query: 558 GWAKKWNDLIEKGPEYGTMEAAW 626
            W+KKW +LIEKGPEYGT EAAW
Sbjct: 60  TWSKKWGELIEKGPEYGTTEAAW 82


>AE014297-2874|AAF55812.2|  494|Drosophila melanogaster CG33094-PB
           protein.
          Length = 494

 Score =  146 bits (353), Expect = 3e-35
 Identities = 63/83 (75%), Positives = 73/83 (87%)
 Frame = +3

Query: 378 MSHHSDEHALLTTTSDSFWEPGNYKRTTKRVDDGHRLCSELQTLVQERADIEKAYAKSLR 557
           MSHHSD+  LL   SDSFWEPGNYKRTTKR++DG++LC++LQ L+QERADIEK YAKSLR
Sbjct: 1   MSHHSDDQ-LLQAGSDSFWEPGNYKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLR 59

Query: 558 GWAKKWNDLIEKGPEYGTMEAAW 626
            W+KKW +LIEKGPEYGT EAAW
Sbjct: 60  TWSKKWGELIEKGPEYGTTEAAW 82


>AE014298-1977|AAF48333.2| 1103|Drosophila melanogaster CG32611-PB
            protein.
          Length = 1103

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = -3

Query: 372  CDTHTPPLTKRTEQCGDAFTRSRINVS--LTHFPVSHDR*FRTIN*TLISNPIFYFTPIL 199
            C  HT     R   CG  F+RS I  +   THFP    + F  +N        +Y+    
Sbjct: 1012 CRVHTGERPFRCNMCGKTFSRSTILKAHEKTHFPKYVRKFFLLLN-------YYYYYYYY 1064

Query: 198  LQRHNKHSTSNNTYNLVTN--KFTNLNI 121
               +N ++ +NN +N   N  + TN NI
Sbjct: 1065 YNNNNNNNNNNNNHNNNANYLQHTNNNI 1092


>BT030302-1|ABN49441.1|  101|Drosophila melanogaster IP18727p
           protein.
          Length = 101

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +3

Query: 405 LLTTTSDSFWEPGNYKRTTKRVDDGHRLCSELQTLVQERADIEKAYAKSLRGWAKKWNDL 584
           LL      FW PG+ K+  +R++D  ++ ++     +ER +IEK +        ++ N L
Sbjct: 30  LLKMVQTIFWLPGHLKKNQQRLEDLAKIYAK-DISEEERDEIEKLFNSKEPLTEERINQL 88

Query: 585 IEKGPE 602
           ++K PE
Sbjct: 89  LDK-PE 93


>BT030292-1|ABN49431.1|  101|Drosophila melanogaster IP18627p
           protein.
          Length = 101

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +3

Query: 405 LLTTTSDSFWEPGNYKRTTKRVDDGHRLCSELQTLVQERADIEKAYAKSLRGWAKKWNDL 584
           LL      FW PG+ K+  +R++D  ++ ++     +ER +IEK +        ++ N L
Sbjct: 30  LLKMVQTIFWLPGHLKKNQQRLEDLAKIYAK-DISEEERDEIEKLFNSKEPLTEERINQL 88

Query: 585 IEKGPE 602
           ++K PE
Sbjct: 89  LDK-PE 93


>BT030280-1|ABN49419.1|  101|Drosophila melanogaster IP18527p
           protein.
          Length = 101

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +3

Query: 405 LLTTTSDSFWEPGNYKRTTKRVDDGHRLCSELQTLVQERADIEKAYAKSLRGWAKKWNDL 584
           LL      FW PG+ K+  +R++D  ++ ++     +ER +IEK +        ++ N L
Sbjct: 30  LLKMVQTIFWLPGHLKKNQQRLEDLAKIYAK-DISEEERDEIEKLFNSKEPLTEERINQL 88

Query: 585 IEKGPE 602
           ++K PE
Sbjct: 89  LDK-PE 93


>BT029723-1|ABL75780.1|  101|Drosophila melanogaster IP17577p
           protein.
          Length = 101

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +3

Query: 405 LLTTTSDSFWEPGNYKRTTKRVDDGHRLCSELQTLVQERADIEKAYAKSLRGWAKKWNDL 584
           LL      FW PG+ K+  +R++D  ++ ++     +ER +IEK +        ++ N L
Sbjct: 30  LLKMVQTIFWLPGHLKKNQQRLEDLAKIYAK-DISEEERDEIEKLFNSKEPLTEERINQL 88

Query: 585 IEKGPE 602
           ++K PE
Sbjct: 89  LDK-PE 93


>AE014298-1775|AAF48170.1|  470|Drosophila melanogaster CG2556-PA
           protein.
          Length = 470

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 525 DIEKAYAKSLRGWAKKWNDLIEKGPEYGTMEA 620
           D+    A S RG   +W +LI+K  E GT+EA
Sbjct: 437 DLTPEEAPSSRGLIAQWENLIKKNAEVGTVEA 468


>AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA
           protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 352 GRCVSVAPPCRTTATSMRCSQPLPTRSGSL 441
           GRC+    P     T +RCS+P P   G++
Sbjct: 318 GRCIQTRCPAGYVWTGIRCSKPQPLELGNI 347


>AY102693-1|AAM27522.1|  433|Drosophila melanogaster LD45181p
           protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 301 DSRTSKGIATLFGSLS*GRCVSVAPPCRTTATSMRCSQP 417
           DS+  K I    G    GRC+S+A P  T     RC QP
Sbjct: 172 DSQCRK-IVCSEGEYKAGRCISLACPAGTVWYQKRCQQP 209


>AE014297-1932|AAF55129.1|  433|Drosophila melanogaster CG6912-PA
           protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 301 DSRTSKGIATLFGSLS*GRCVSVAPPCRTTATSMRCSQP 417
           DS+  K I    G    GRC+S+A P  T     RC QP
Sbjct: 172 DSQCRK-IVCSEGEYKAGRCISLACPAGTVWYQKRCQQP 209


>AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase
           guanine nucleotideexchange factor GEF64C protein.
          Length = 1984

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -1

Query: 467 SLGGPLVVTRLPERVGSGCEQRMLVAVVRHGGATLTHRP*LSEPNSVAMPLLVR 306
           ++GG     RLP   GS   +R + A +R   AT   RP + +P      L+ R
Sbjct: 180 TIGGTGGTVRLPAVSGSSSSRRPMAATMRVVSATKKSRPSILDPQKDPYDLMRR 233


>AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA
           protein.
          Length = 1984

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -1

Query: 467 SLGGPLVVTRLPERVGSGCEQRMLVAVVRHGGATLTHRP*LSEPNSVAMPLLVR 306
           ++GG     RLP   GS   +R + A +R   AT   RP + +P      L+ R
Sbjct: 180 TIGGTGGTVRLPAVSGSSSSRRPMAATMRVVSATKKSRPSILDPQKDPYDLMRR 233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,043,031
Number of Sequences: 53049
Number of extensions: 609598
Number of successful extensions: 1518
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1515
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)