Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV13l15f
         (662 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019851-1|AAH19851.1|  159|Homo sapiens transmembrane protein 4...    50   1e-05
D87989-1|BAA13525.1|  322|Homo sapiens UDP-galactose transporter...    30   6.4  
BC011888-1|AAH11888.1|  322|Homo sapiens solute carrier family 3...    30   6.4  
BC063489-1|AAH63489.1|  301|Homo sapiens transmembrane and ubiqu...    30   8.5  
BC004306-1|AAH04306.1|   94|Homo sapiens TMUB2 protein protein.        30   8.5  
BC001792-1|AAH01792.1|   94|Homo sapiens TMUB2 protein protein.        30   8.5  
AY358780-1|AAQ89140.1|  301|Homo sapiens ELSD1897 protein.             30   8.5  
AK021759-1|BAB13886.1|  181|Homo sapiens protein ( Homo sapiens ...    30   8.5  

>BC019851-1|AAH19851.1|  159|Homo sapiens transmembrane protein 42
           protein.
          Length = 159

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 25/72 (34%), Positives = 37/72 (51%)
 Frame = +3

Query: 300 LIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVLSGFIGIVLFEEPSSTQWWAGA 479
           +I+M   N+     + R L  + +S   +V    S+ + S F+G VL+ E     WW G 
Sbjct: 74  IIVMASTNSLMWTFFSRGLSFSMSSAIASVTVTFSNILSSAFLGYVLYGECQEVLWWGGV 133

Query: 480 ILIIMGLTLIAR 515
            LI+ GLTLI R
Sbjct: 134 FLILCGLTLIHR 145


>D87989-1|BAA13525.1|  322|Homo sapiens UDP-galactose transporter
           related isozyme 1 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 432 IVLFEEPSSTQWWAGAILIIMGLTLIAR 515
           ++LF  P S   W G +L+ +GL L A+
Sbjct: 285 VILFANPISPMQWVGTVLVFLGLGLDAK 312


>BC011888-1|AAH11888.1|  322|Homo sapiens solute carrier family 35,
           member B1 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 432 IVLFEEPSSTQWWAGAILIIMGLTLIAR 515
           ++LF  P S   W G +L+ +GL L A+
Sbjct: 285 VILFANPISPMQWVGTVLVFLGLGLDAK 312


>BC063489-1|AAH63489.1|  301|Homo sapiens transmembrane and
           ubiquitin-like domain containing 2 protein.
          Length = 301

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 258 ESVVGDSYAISGVILIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVL 416
           E V  +   ++GV+++I+ LV  W S +     D+  N +   ++SA  + VL
Sbjct: 10  EGVGNEVMVVAGVVVLILALVLAWLSTYV---ADSGSNQLLGAIVSAGDTSVL 59


>BC004306-1|AAH04306.1|   94|Homo sapiens TMUB2 protein protein.
          Length = 94

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 258 ESVVGDSYAISGVILIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVL 416
           E V  +   ++GV+++I+ LV  W S +     D+  N +   ++SA  + VL
Sbjct: 10  EGVGNEVMVVAGVVVLILALVLAWLSTYV---ADSGSNQLLGAIVSAGDTSVL 59


>BC001792-1|AAH01792.1|   94|Homo sapiens TMUB2 protein protein.
          Length = 94

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 258 ESVVGDSYAISGVILIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVL 416
           E V  +   ++GV+++I+ LV  W S +     D+  N +   ++SA  + VL
Sbjct: 10  EGVGNEVMVVAGVVVLILALVLAWLSTYV---ADSGSNQLLGAIVSAGDTSVL 59


>AY358780-1|AAQ89140.1|  301|Homo sapiens ELSD1897 protein.
          Length = 301

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 258 ESVVGDSYAISGVILIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVL 416
           E V  +   ++GV+++I+ LV  W S +     D+  N +   ++SA  + VL
Sbjct: 10  EGVGNEVMVVAGVVVLILALVLAWLSTYV---ADSGSNQLLGAIVSAGDTSVL 59


>AK021759-1|BAB13886.1|  181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11697 fis, clone HEMBA1005035. ).
          Length = 181

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 258 ESVVGDSYAISGVILIIMVLVNTWSSRHYLRSLDAAPNSVAPTVISAASSYVL 416
           E V  +   ++GV+++I+ LV  W S +     D+  N +   ++SA  + VL
Sbjct: 10  EGVGNEVMVVAGVVVLILALVLAWLSTYV---ADSGSNQLLGAIVSAGDTSVL 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,520,338
Number of Sequences: 237096
Number of extensions: 1718493
Number of successful extensions: 2476
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2476
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)